DRSC/TRiP Functional Genomics Resources

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Protein Alignment mew and itga11a

DIOPT Version :9

Sequence 1:NP_001285196.1 Gene:mew / 32275 FlyBaseID:FBgn0004456 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001166098.1 Gene:itga11a / 541475 ZFINID:ZDB-GENE-050324-1 Length:1190 Species:Danio rerio


Alignment Length:1373 Identity:288/1373 - (20%)
Similarity:473/1373 - (34%) Gaps:492/1373 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 FNLEQRLPIVKYGHPHSHFGYSVATHTIGEANGPNKTNCVLVGAPLDQNRQPNTTHSGALWRCPM 98
            ||::.|...:..|...:.|||:|..|..|      ....:||||||:.|.|..|   |.:::||:
Zfish    23 FNIDTRNHRIIKGPRQTQFGYTVQQHIAG------GQKWLLVGAPLETNGQHQT---GDVYKCPL 78

  Fly    99 TQRF--DDCEQVITDGRRNFDSEILSPPGNDEIKEDQWMGVTVRSNPLQANGSGGKVIVCAHRYM 161
            ::|.  ..|.::      |...  :|.....|.||...:|:|:.|||     .....:.|...:.
Zfish    79 SRRSGGPSCSKL------NLGK--ISLTNVSERKERMRLGMTLSSNP-----KDNSFVACGPLWS 130

  Fly   162 YIVRENRYGQGLCYLLTNDLQFEEVHEP----CK------------------------------- 191
            |....:.|..|:|..:....:|.....|    |:                               
Zfish   131 YECGSSYYSTGICSRVNASFKFSRTIAPAFQRCETYMDIVIVLDGSNSIYPWNEVQDFLINILRK 195

  Fly   192 ---------------GRPV-----------------------QRQHED----------------- 201
                           |..|                       ||..|:                 
Zfish   196 FYVGPGQIQVGVLQYGEKVVSEFQLNDFRSVEDVVKAARKIGQRGGEETNTALGINVARSEAFKQ 260

  Fly   202 ----------------------------------------------------------------- 201
                                                                             
Zfish   261 GGRRGAKKVMIVITDGESHDSADLQQVIEESEKDGITRYAIAVLGYYNRRGINPEAFLNEIKYIA 325

  Fly   202 ----------------------------------------YGL--CQAGTSAALLDDDTMVLGSP 224
                                                    :||  .|||.|...::|..:| |:.
Zfish   326 SDPDDKHFFNVTDEAALKDIVDALGERIFSLEGTSKNGTAFGLQMSQAGFSTHTVEDGILV-GAV 389

  Fly   225 GPYTWRGSIWVTQVGGEYLQRDKTTYYSDHSDLNSPVDKYSYLGMSVT------GGRFFGHMSYA 283
            |.|.|.|::......|:.:. .|::|..:..:  ...:..:|||.:||      .|:.     |.
Zfish   390 GAYDWNGAVLKETRQGKVVP-PKSSYEQEFPE--ELKNHGAYLGYTVTSVVSARSGQL-----YV 446

  Fly   284 AGAPRSEGHGQVVIFD-KSTDNPIPVHSILDGEQFGSSFGYELATADINGDHRPD-LIVAAPLYF 346
            |||||....|:|:||. |:|.....:|| |.|:|.||.:|.|:|..||:.|...| |:||||::|
Zfish   447 AGAPRFNHTGKVIIFTLKNTGELTILHS-LKGQQIGSYYGSEIAPVDIDNDGVTDNLLVAAPMFF 510

  Fly   347 T-KTEGGAVYVYQNIQDTLPMKYTLKLTGPLE-------SRFGLALANIGDLNKDNCEDLAVGAP 403
            : ..|.|.||:|:..:..   ::.|:  |.||       :|||.|||.:.|||.|:..|:.||||
Zfish   511 SGGWEKGKVYIYRVTEQP---RFILE--GSLEVLDQGQNARFGSALAPVPDLNGDSFNDVVVGAP 570

  Fly   404 YEGN--GVVYIYLGSSQGLNSKPAQKIQASELGGTIPNGQPIRTFGISISGNTDLDDNSYPDVVI 466
            .|.:  |.:|||......:..|..|:|.|.:||   |.   ::.||.||.|..|::.:...|:.:
Zfish   571 LEDDHKGAIYIYHSQRNRILRKYKQRIGAVQLG---PG---LQYFGRSIHGKMDMNGDDLVDLAV 629

  Fly   467 GAFNSSAAVILLARPIISIQTSVQ----RKELHNMDPNTPG----CLDDPASNLTCFTFRACCSI 523
            |:.  .|||:|.:|.:|.|.:.|:    :..:.|.|....|    |:    |.:.|....|...|
Zfish   630 GSL--GAAVLLWSRSVIRINSVVRFEPSKINIFNKDCRRGGKDVTCM----SAIVCLNVTARTPI 688

  Fly   524 EPYDEKNKELRLAYSVEAETFDHLKKFS-RVFFFDRENKRTNVLSRVVRVHTNGRTECQAVTGYI 587
            .|    ::|:.|.||    .|...|:|: |..|.|.:.::...|:.:     .|...|..:..::
Zfish   689 NP----SQEIALRYS----AFFEEKRFNPRAVFDDPDRQQPQNLTLL-----PGEETCDHIYFHV 740

  Fly   588 KANTRDIQTPVRFRLKYSLVE----PPLADSALVRLNPILDQTQAHVDFEGTFQKDCGDDDLCES 648
             ..|.|...|:.|.::..|::    |.|.||.     |...:||.      .|...|.:||.|..
Zfish   741 -METTDYARPIIFTVETELLDLYHGPVLDDSW-----PTTVKTQL------PFWNGCDEDDHCVP 793

  Fly   649 NLIIRVEPNI---------------------TESSGNEYTLILDETELEVRINVSNLADSAYEAQ 692
            :|:::...::                     |.:..:|..:.....::.|.:.:.|..::||.|:
Zfish   794 DLLLQAHTDLMNRQQFCGQAFRAASLLCQGHTSTDPSERIIEGSRRKMVVDVRLENRGENAYGAK 858

  Fly   693 LFIAHQAGVSY----VATKKPTNATCNSYNTTLV--ACSLGNPMLRDTTTFVTIRFQPKGLEPSE 751
            |.|.:...:.:    |......:..|.:.|....  .|::..|.:| ..:.|..|.:   .|.|.
Zfish   859 LNITYTQNLRFSSLIVKDNSDIHIDCRNENKRKYEKTCNISEPFMR-AKSQVIFRLE---FEFSH 919

  Fly   752 KIMLFH--IFANTTSKLVGPE----RPERDLRVNVVRRAKLNFRGWAIPEQSFYSGSSVANSVAN 810
            .::|.|  |....||:  |.|    ....::..|:...|.|.|      .:.||           
Zfish   920 SVLLDHVRIILEVTSE--GEEVILYDNSNEIFYNLKYEADLLF------TRDFY----------- 965

  Fly   811 TAATDIEGHGPMGM---DDVGSQVHHMFTIFNEGPSTAPKVQMVIHWPYSLYSDPQSGRPVQYLL 872
              .|..|....:.:   ||.....:..|.|.|.|......:|:.|       :.|:..:....||
Zfish   966 --PTRYELKPDLSLEKADDFNPPFNFTFQIQNLGYFPIQDLQLYI-------AIPEVTKNGNQLL 1021

  Fly   873 YLEQVPTVEVSQGECHVAKEYVNPLNLASGSRENPAYLSAPAQMRMFPSQSRHSFNKSLIHSQRS 937
            .:......::...:|      :.|.::|. ||.:|                              
Zfish  1022 QIRDFHIDQIGGSQC------IPPQHVAH-SRASP------------------------------ 1049

  Fly   938 YYSSSHRDDHSDDTQSNRNRVRRSFLERVTRLERLMYDPESSNAANGKKQDIVELDCNKGATNCV 1002
                                      |.::|..||.|    ||                  |..|
Zfish  1050 --------------------------EDLSRTSRLNY----SN------------------TLAV 1066

  Fly  1003 RIECDILNMPALSEAQVVVKARLWNSTLVSEYPRVERVRIFSTATAQ--------IPESYGVEVM 1059
            .::|.: |:|:..:..|.:...|....|  ...:.:.:.:.:||:.:        :||...|.  
Zfish  1067 PVQCTV-NLPSYRDVSVKIGGSLRTDAL--HALKFKTLELVTTASVELNPSSPMFLPEERPVR-- 1126

  Fly  1060 DHNNIEVETRAYPELRNQQRDTSIPWLIIILGIVGGLLLLALVTYVLWKVGFFKRIRPTDPTLSG 1124
             |..:|:         .::.|..:|..|||...:||||||:|:...|||:|||:|          
Zfish  1127 -HIILEI---------RKEEDYRVPIWIIIGSTLGGLLLLSLLILALWKLGFFQR---------- 1171

  Fly  1125 NLEKMNEE 1132
              :|..||
Zfish  1172 --QKRREE 1177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mewNP_001285196.1 Int_alpha 48..111 CDD:214549 20/64 (31%)
Int_alpha 317..368 CDD:214549 20/52 (38%)
Int_alpha 378..428 CDD:214549 22/51 (43%)
Int_alpha 446..491 CDD:214549 16/48 (33%)
Integrin_alpha2 479..1006 CDD:285619 104/575 (18%)
itga11aNP_001166098.1 Int_alpha 39..88 CDD:214549 19/57 (33%)
vWA_integrins_alpha_subunit 167..345 CDD:238746 5/177 (3%)
Int_alpha 480..527 CDD:214549 20/46 (43%)
Int_alpha 543..587 CDD:214549 20/43 (47%)
VCBS 556..629 CDD:290251 28/78 (36%)
Integrin_alpha2 640..1042 CDD:285619 91/468 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3637
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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