DRSC/TRiP Functional Genomics Resources

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Protein Alignment mew and itga3a

DIOPT Version :9

Sequence 1:NP_001285196.1 Gene:mew / 32275 FlyBaseID:FBgn0004456 Length:1243 Species:Drosophila melanogaster
Sequence 2:XP_017210291.1 Gene:itga3a / 407685 ZFINID:ZDB-GENE-090805-3 Length:1073 Species:Danio rerio


Alignment Length:1190 Identity:315/1190 - (26%)
Similarity:508/1190 - (42%) Gaps:269/1190 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LGILIILQCVLTCYNFNLEQRLPIVKYGH-PHSHFGYSVATH--TIGEANGPNKTNCVLVGAPLD 80
            |.::.:|.....|..|||:....:||.|. ..|.||.|||.|  .:.|     |.:.:|||||.:
Zfish    11 LTLVFVLSAARLCQAFNLDVSFAVVKEGKTAGSLFGLSVALHEQVVNE-----KRHMLLVGAPKE 70

  Fly    81 QNRQP-NTTHSGALWRCPMTQRFDDCEQVITDGRRNFDSEILSPPGNDEIK----EDQWMGVTV- 139
            :.... :...:|.::.||::....||      .|.|..|.  :|....::|    :..|:||:: 
Zfish    71 KAESGLSANETGDVYACPISADSKDC------ARLNLISS--NPEDKPDLKNYVIDGMWLGVSIV 127

  Fly   140 -RSNPLQANGSGGKVIVCAHRYMYIVRENRYGQGLCYLLTNDL-------QFEEVHEPCKGRPVQ 196
             :|.|      ||:|:.|.|||:.....|....|.||:..|||       |::...|.|..|..|
Zfish   128 SQSQP------GGRVVACGHRYIRNFTSNFRMIGRCYVRGNDLQLNLSDYQWQSYDEICDPREAQ 186

  Fly   197 RQHEDYGLCQAGTSAALLDDDTMVLGSPGPYTWRGSIWVTQVGGEYLQRDKTTYYSDHSDLNSPV 261
            ...   |:|..|.|||:...: :..|:||.:.|:|:|:                    |..::|.
Zfish   187 NSE---GMCLLGMSAAVTFSE-IFFGAPGCFNWQGNIF--------------------SKWHNPA 227

  Fly   262 DKY----SYLGMSVTGGRFFGHM-------------SYAAGAPRSEGHGQVV---IFDKSTDNPI 306
            |::    |.|..|..|..:.|:.             :...||||.|..|.|:   :........:
Zfish   228 DEFHLLKSKLPDSRKGNIYIGYSTIVDQDVLVKGKDTVVTGAPRDEAKGSVMMAEVLKSGGSGEV 292

  Fly   307 PVHSILDGEQFGSSFGYELATADINGDHRPDLIVAAPLYFTK--TEGGAVYVYQNIQDTLPMKYT 369
            .:...:.|||.||.||..:|..|:|.|...||||.||.||.:  .:|||||||.|...:...|..
Zfish   293 KIKVTVTGEQVGSYFGNSVAVVDLNNDGWKDLIVGAPFYFDRKMDKGGAVYVYMNQNGSFRNKSD 357

  Fly   370 LKLTGPLESRFGLALANIGDLNKDNCEDLAVGAPYEGNGVVYIYLGSSQGLNSKPAQKIQASELG 434
            :.||||.:|.||:::..|||:|:|..:|.||||||...|.|.|:.||..|::.:|:|.|.    |
Zfish   358 VVLTGPKDSGFGMSVVAIGDVNQDGFQDFAVGAPYHSTGRVSIWTGSKTGISQEPSQVID----G 418

  Fly   435 GTIPNGQPIRTFGISISGNTDLDDNSYPDVVIGAFNSSAAVILLARPIISIQTSVQRKELHNMDP 499
            ..||.| ..:|||.|||...|:|.|.|||:.:|:.: ...|:|.:||:|.:      |....:.|
Zfish   419 KDIPGG-GFQTFGYSISRGLDVDRNGYPDIAVGSLD-DRVVLLRSRPVIHL------KNTFTVTP 475

  Fly   500 ---NTPGCLDDPASNLTCFTFRACCSIEPYD----EKNKELRLAYSVEAETFDHLKKFSRVFFFD 557
               |...|       :.|...:.|.|. .|.    ...|.:.|.|:|||:  ....:..||.|.|
Zfish   476 MVINLEDC-------VACIEAKVCFSY-TYSTGTASSQKAVTLQYTVEAD--QQSSRSPRVSFLD 530

  Fly   558 -RENKRTNVLSRVVRVHTNGRTECQAVTGYIKANT-RDIQTPVRFRLKYSLVEPPLADSALVR-- 618
             .:.|.|..:|    |:.:|  :|.::...:.:.| :|..:.:.|:|..|:|:||.:...::.  
Zfish   531 NNKGKYTGKMS----VNPSG--DCHSLKLELASKTIQDKVSAIIFQLSVSVVDPPPSGGKMLEDL 589

  Fly   619 -LNPILDQTQA-------HVDFEGTFQKDCGDDDLCESNLII-------RVEPNITESSGNEYTL 668
             ..|::.|..|       |:      ||.||.|:.|||||.:       :..|.:.:.....:..
Zfish   590 SAFPVISQRDALTGRAEIHI------QKACGLDNKCESNLQMTAAFTDEKNTPFLMQEDHQIFNY 648

  Fly   669 ILDETELEVRINVSNL------ADSAYEAQLFIAHQAGVSYVATKKPTNATCN---SYNTTLVAC 724
            ..|..:|::.:||||:      |:.||.|.|.|...:.:|:.:......:|.|   |...:.:.|
Zfish   649 TTDIKKLKLLVNVSNVPSEGRKAEDAYNAILNITIPSSLSFSSLNPKLPSTLNGDPSSGGSYLLC 713

  Fly   725 SLGNPMLRDTTTFVTIRFQPKGLEPSEKIMLFHIFANTTSKLVGPERPERDLR------------ 777
            :||:|...:....:.|.|:..|:....:.:...:..:|.|       .:.|||            
Zfish   714 TLGDPFKSNQRVEIEITFETSGISIDMQEIETELQLSTLS-------DQNDLRPLSRVLLVEYIL 771

  Fly   778 ---VNVVRRAKLNFRGWAIPEQSFYSGSSVANSVANTAATDIEGHGPMGMDDVGSQVHHMFTIFN 839
               .|::...:..|.|..:.|.:..|.|.:.:.|....:.||.|. |:|               |
Zfish   772 QPLFNLIPYFRAEFSGNVVGESAMKSTSDIGSPVEFNISVDISGK-PLG---------------N 820

  Fly   840 EGPSTAPKVQMVIHWPYSLYSDPQSGRPVQYLLYLEQVPTVEVSQGECHVAKEYVNPLNLASGSR 904
            .|     .:::|..||.::.::       ::||||.::.....|:..| |||..||||||....|
Zfish   821 LG-----FLEVVFQWPSAVANE-------KWLLYLSEIQMTGTSESFC-VAKGIVNPLNLTVSER 872

  Fly   905 ENPAYLSAPAQMRMFPSQSRHSFNKSLIHSQRSYYSSSHRDDHSDDTQSNRNRVRRSFLERVTRL 969
            :               |:.|          :|....|..:...|..|:..:|:.|.         
Zfish   873 K---------------SRRR----------KRDEVLSESKLAMSQKTRQGQNKPRE--------- 903

  Fly   970 ERLMYDPESSNAANGKKQDIVELDCNKGATNCVRIECDILNMPALSEAQVVVKARLWNSTLVSEY 1034
                                 .|:|.||...|....|.:..|.  :.|.:.|:||:||||::.:|
Zfish   904 ---------------------VLNCTKGTARCQTFSCPLSAMK--TSAMLTVRARVWNSTMLEDY 945

  Fly  1035 PRVERVRIFSTATAQIPESYGVEVMDHN----NIEVETRAYPELRNQQRDTSIPWLIIILGIVGG 1095
             |.:.|.:..:....:........|::|    .:|::.....||..:     .|..|||:.::.|
Zfish   946 -RAKGVSVQGSVMLTLKTDKKNIKMNNNIREFTVEIDPAVAEELPYE-----APLWIIIVSVLSG 1004

  Fly  1096 LLLLALVTYVLWKVGFFKRI 1115
            :::|.::..:|||.|||.||
Zfish  1005 VVMLGVIVILLWKSGFFTRI 1024

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mewNP_001285196.1 Int_alpha 48..111 CDD:214549 19/65 (29%)
Int_alpha 317..368 CDD:214549 24/52 (46%)
Int_alpha 378..428 CDD:214549 23/49 (47%)
Int_alpha 446..491 CDD:214549 17/44 (39%)
Integrin_alpha2 479..1006 CDD:285619 124/576 (22%)
itga3aXP_017210291.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574980
Domainoid 1 1.000 70 1.000 Domainoid score I9498
eggNOG 1 0.900 - - E1_KOG3637
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 401 1.000 Inparanoid score I1884
OMA 1 1.010 - - QHG46425
OrthoDB 1 1.010 - - D325432at33208
OrthoFinder 1 1.000 - - FOG0001200
OrthoInspector 1 1.000 - - otm26039
orthoMCL 1 0.900 - - OOG6_102503
Panther 1 1.100 - - O PTHR23220
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X929
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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