DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mew and ITGAD

DIOPT Version :9

Sequence 1:NP_001285196.1 Gene:mew / 32275 FlyBaseID:FBgn0004456 Length:1243 Species:Drosophila melanogaster
Sequence 2:XP_011544137.1 Gene:ITGAD / 3681 HGNCID:6146 Length:1190 Species:Homo sapiens


Alignment Length:1031 Identity:240/1031 - (23%)
Similarity:401/1031 - (38%) Gaps:302/1031 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 QHEDYGLCQAGTSAALL----------DDDTMVLGSPGPYTWRGSIWVTQVGGEYLQRDKTTYYS 252
            |||   :.|.|.|.||.          ..|.:.||:.|.::|.|..::      |......|:.:
Human   347 QHE---MSQEGFSTALTMSLPSPGILSSQDGLFLGAVGSFSWSGGAFL------YPPNMSPTFIN 402

  Fly   253 ---DHSDLNSPVDKYSYLGMSVTGGRFFGHMSYAAGAPRSEGHGQVVIFD-------KSTDNPIP 307
               ::.|:..     ||||.|.....:.|..:...||||.:..|:.|||.       |..:    
Human   403 MSQENVDMRD-----SYLGYSTELALWKGVQNLVLGAPRYQHTGKAVIFTQVSRQWRKKAE---- 458

  Fly   308 VHSILDGEQFGSSFGYELATADINGDHRPDLI-VAAPLYFTKTEGGAVYVY-----QNIQ---DT 363
                :.|.|.||.||..|.:.|::.|...||| :.||.|:.:|.||.|.|.     |.:|   |.
Human   459 ----VTGTQIGSYFGASLCSVDVDSDGSTDLILIGAPHYYEQTRGGQVSVCPLPRGQRVQWQCDA 519

  Fly   364 LPMKYTLKLTGPLE---SRFGLALANIGDLNKDNCEDLAVGAP--YEGNGVVYIYLGSSQ-GLNS 422
            :       |.|...   .|||.||..:||:|:|...|:|:|||  .|..|.||::.|:|: |::.
Human   520 V-------LRGEQGHPWGRFGAALTVLGDVNEDKLIDVAIGAPGEQENRGAVYLFHGASESGISP 577

  Fly   423 KPAQKIQASELGGTIPNGQPIRTFGISISGNTDLDDNSYPDVVIGAFNSSAAVILLARPIISIQT 487
            ..:|:|.:|:|.   |.   ::.||.::||..||..:...|:.:||  ....::|.:.|::.:..
Human   578 SHSQRIASSQLS---PR---LQYFGQALSGGQDLTQDGLMDLAVGA--RGQVLLLRSLPVLKVGV 634

  Fly   488 SVQ------RKELHNMDPNTPGCLDDPASNLT-CFTFRACCSIEPYDEKNKELRLAYSVEAETFD 545
            :::      .|.::......|..|:  |.:.| |.|.:. .|::...:....:|...::     |
Human   635 AMRFSPVEVAKAVYRCWEEKPSALE--AGDATVCLTIQK-SSLDQLGDIQSSVRFDLAL-----D 691

  Fly   546 HLKKFSRVFFFDREN---KRTNVLSRVVRVHTNGRTECQAVTGYIKANTRDIQTPVRFRLKYSLV 607
            ..:..||..|.:.:|   .|...|.  :.:|      |:.:...:.....|:.:|:...|.:|||
Human   692 PGRLTSRAIFNETKNPTLTRRKTLG--LGIH------CETLKLLLPDCVEDVVSPIILHLNFSLV 748

  Fly   608 EPPLADSALVRLNPIL-----DQTQAHVDFEGTFQKDCGDDDLCESNLIIRVEPNITES-SGNEY 666
            ..|:....  .|.|:|     |...|.:.||    |:||.|.|||.:|      .:|.| ||.:.
Human   749 REPIPSPQ--NLRPVLAVGSQDLFTASLPFE----KNCGQDGLCEGDL------GVTLSFSGLQT 801

  Fly   667 TLILDETELEVRINVSNLADSAYEAQLFIAHQAGVSYVATKKPTNATCNSYNTTL-VACSLGNPM 730
            ..:....||.|.:.|.|..:.:|...:.:.:.||:|:   ::.:.|....:.:.| :||.     
Human   802 LTVGSSLELNVIVTVWNAGEDSYGTVVSLYYPAGLSH---RRVSGAQKQPHQSALRLACE----- 858

  Fly   731 LRDTTTFVTIRFQPKGLEPSEKIM---LFHIFANTTSKLVGPERPERDLRVNVVRRAKLNFRGWA 792
                    |:..:.:||..|...:   :||..:|.|..:......:..|...::.||        
Human   859 --------TVPTEDEGLRSSRCSVNHPIFHEGSNGTFIVTFDVSYKATLGDRMLMRA-------- 907

  Fly   793 IPEQSFYSGSSVANSVANTAATDIEGHGPMGMDDVGSQVHHMFTIFNEGPSTAPKVQMVIHWPYS 857
                   |.||..|..:::.||                                 .|:.:...|:
Human   908 -------SASSENNKASSSKAT---------------------------------FQLELPVKYA 932

  Fly   858 LYS----DPQSGRPVQYLLYL------------------EQVPTVE-------VSQGECHVAKEY 893
            :|:    .|..|.|:..|.:|                  :::...|       :||.:..::..:
Human   933 VYTMISRCPVPGLPLGPLAFLYAWQEESTKYFNFATSDEKKMKEAEHRYRVNNLSQRDLAISINF 997

  Fly   894 VNPLNLASGSRENPAYLSAPAQMRMFPSQSRHSFNKSLIHSQRSYYSSSHRDDHSDDTQSNRNRV 958
            ..|: |.:|.......:.||:|.....|:.:                   ...|||         
Human   998 WVPV-LLNGVAVWDVVMEAPSQSLPCVSERK-------------------PPQHSD--------- 1033

  Fly   959 RRSFLERVTRLERLMYDPESSNAANGKKQDIVELDCNKGATNCVRIECDILNMPALSEAQVVVKA 1023
               ||.:::|...                    |||:  ..:|::..||:.:.....|....:|.
Human  1034 ---FLTQISRSPM--------------------LDCS--IADCLQFRCDVPSFSVQEELDFTLKG 1073

  Fly  1024 RL---W-NSTLVSEYPRVERVRI-FSTAT-AQIPESYGVEVMDHNNIEV---ETRAYPELRNQQR 1079
            .|   | ..||..:...|....| |.|:. :|:|   |.|......:|:   |...|        
Human  1074 NLSFGWVRETLQKKVLVVSVAEITFDTSVYSQLP---GQEAFMRAQMEMVLEEDEVY-------- 1127

  Fly  1080 DTSIPWLIIILG-IVGGLLLLALVTYVLWKVGFFKRIRPTDPTLSGNLEKMNEEKP 1134
             .:||   ||:| .||.||||||:|..|:|:|||||          :.::|.|:||
Human  1128 -NAIP---IIMGSSVGALLLLALITATLYKLGFFKR----------HYKEMLEDKP 1169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mewNP_001285196.1 Int_alpha 48..111 CDD:214549
Int_alpha 317..368 CDD:214549 21/59 (36%)
Int_alpha 378..428 CDD:214549 22/52 (42%)
Int_alpha 446..491 CDD:214549 11/50 (22%)
Integrin_alpha2 479..1006 CDD:285619 103/575 (18%)
ITGADXP_011544137.1 vWA_integrins_alpha_subunit 149..324 CDD:238746
Int_alpha 464..>506 CDD:214549 18/41 (44%)
Int_alpha 528..583 CDD:214549 22/54 (41%)
Int_alpha 593..>625 CDD:214549 9/33 (27%)
Integrin_alpha2 628..>933 CDD:285619 77/396 (19%)
Integrin_alpha 1153..1167 CDD:278771 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142039
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3637
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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