DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mew and ITGAD

DIOPT Version :10

Sequence 1:NP_001285196.1 Gene:mew / 32275 FlyBaseID:FBgn0004456 Length:1243 Species:Drosophila melanogaster
Sequence 2:XP_011544137.1 Gene:ITGAD / 3681 HGNCID:6146 Length:1190 Species:Homo sapiens


Alignment Length:1031 Identity:240/1031 - (23%)
Similarity:401/1031 - (38%) Gaps:302/1031 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 QHEDYGLCQAGTSAALL----------DDDTMVLGSPGPYTWRGSIWVTQVGGEYLQRDKTTYYS 252
            |||   :.|.|.|.||.          ..|.:.||:.|.::|.|..::      |......|:.:
Human   347 QHE---MSQEGFSTALTMSLPSPGILSSQDGLFLGAVGSFSWSGGAFL------YPPNMSPTFIN 402

  Fly   253 ---DHSDLNSPVDKYSYLGMSVTGGRFFGHMSYAAGAPRSEGHGQVVIFD-------KSTDNPIP 307
               ::.|:..     ||||.|.....:.|..:...||||.:..|:.|||.       |..:    
Human   403 MSQENVDMRD-----SYLGYSTELALWKGVQNLVLGAPRYQHTGKAVIFTQVSRQWRKKAE---- 458

  Fly   308 VHSILDGEQFGSSFGYELATADINGDHRPDLI-VAAPLYFTKTEGGAVYVY-----QNIQ---DT 363
                :.|.|.||.||..|.:.|::.|...||| :.||.|:.:|.||.|.|.     |.:|   |.
Human   459 ----VTGTQIGSYFGASLCSVDVDSDGSTDLILIGAPHYYEQTRGGQVSVCPLPRGQRVQWQCDA 519

  Fly   364 LPMKYTLKLTGPLE---SRFGLALANIGDLNKDNCEDLAVGAP--YEGNGVVYIYLGSSQ-GLNS 422
            :       |.|...   .|||.||..:||:|:|...|:|:|||  .|..|.||::.|:|: |::.
Human   520 V-------LRGEQGHPWGRFGAALTVLGDVNEDKLIDVAIGAPGEQENRGAVYLFHGASESGISP 577

  Fly   423 KPAQKIQASELGGTIPNGQPIRTFGISISGNTDLDDNSYPDVVIGAFNSSAAVILLARPIISIQT 487
            ..:|:|.:|:|.   |.   ::.||.::||..||..:...|:.:||  ....::|.:.|::.:..
Human   578 SHSQRIASSQLS---PR---LQYFGQALSGGQDLTQDGLMDLAVGA--RGQVLLLRSLPVLKVGV 634

  Fly   488 SVQ------RKELHNMDPNTPGCLDDPASNLT-CFTFRACCSIEPYDEKNKELRLAYSVEAETFD 545
            :::      .|.::......|..|:  |.:.| |.|.:. .|::...:....:|...::     |
Human   635 AMRFSPVEVAKAVYRCWEEKPSALE--AGDATVCLTIQK-SSLDQLGDIQSSVRFDLAL-----D 691

  Fly   546 HLKKFSRVFFFDREN---KRTNVLSRVVRVHTNGRTECQAVTGYIKANTRDIQTPVRFRLKYSLV 607
            ..:..||..|.:.:|   .|...|.  :.:|      |:.:...:.....|:.:|:...|.:|||
Human   692 PGRLTSRAIFNETKNPTLTRRKTLG--LGIH------CETLKLLLPDCVEDVVSPIILHLNFSLV 748

  Fly   608 EPPLADSALVRLNPIL-----DQTQAHVDFEGTFQKDCGDDDLCESNLIIRVEPNITES-SGNEY 666
            ..|:....  .|.|:|     |...|.:.||    |:||.|.|||.:|      .:|.| ||.:.
Human   749 REPIPSPQ--NLRPVLAVGSQDLFTASLPFE----KNCGQDGLCEGDL------GVTLSFSGLQT 801

  Fly   667 TLILDETELEVRINVSNLADSAYEAQLFIAHQAGVSYVATKKPTNATCNSYNTTL-VACSLGNPM 730
            ..:....||.|.:.|.|..:.:|...:.:.:.||:|:   ::.:.|....:.:.| :||.     
Human   802 LTVGSSLELNVIVTVWNAGEDSYGTVVSLYYPAGLSH---RRVSGAQKQPHQSALRLACE----- 858

  Fly   731 LRDTTTFVTIRFQPKGLEPSEKIM---LFHIFANTTSKLVGPERPERDLRVNVVRRAKLNFRGWA 792
                    |:..:.:||..|...:   :||..:|.|..:......:..|...::.||        
Human   859 --------TVPTEDEGLRSSRCSVNHPIFHEGSNGTFIVTFDVSYKATLGDRMLMRA-------- 907

  Fly   793 IPEQSFYSGSSVANSVANTAATDIEGHGPMGMDDVGSQVHHMFTIFNEGPSTAPKVQMVIHWPYS 857
                   |.||..|..:::.||                                 .|:.:...|:
Human   908 -------SASSENNKASSSKAT---------------------------------FQLELPVKYA 932

  Fly   858 LYS----DPQSGRPVQYLLYL------------------EQVPTVE-------VSQGECHVAKEY 893
            :|:    .|..|.|:..|.:|                  :::...|       :||.:..::..:
Human   933 VYTMISRCPVPGLPLGPLAFLYAWQEESTKYFNFATSDEKKMKEAEHRYRVNNLSQRDLAISINF 997

  Fly   894 VNPLNLASGSRENPAYLSAPAQMRMFPSQSRHSFNKSLIHSQRSYYSSSHRDDHSDDTQSNRNRV 958
            ..|: |.:|.......:.||:|.....|:.:                   ...|||         
Human   998 WVPV-LLNGVAVWDVVMEAPSQSLPCVSERK-------------------PPQHSD--------- 1033

  Fly   959 RRSFLERVTRLERLMYDPESSNAANGKKQDIVELDCNKGATNCVRIECDILNMPALSEAQVVVKA 1023
               ||.:::|...                    |||:  ..:|::..||:.:.....|....:|.
Human  1034 ---FLTQISRSPM--------------------LDCS--IADCLQFRCDVPSFSVQEELDFTLKG 1073

  Fly  1024 RL---W-NSTLVSEYPRVERVRI-FSTAT-AQIPESYGVEVMDHNNIEV---ETRAYPELRNQQR 1079
            .|   | ..||..:...|....| |.|:. :|:|   |.|......:|:   |...|        
Human  1074 NLSFGWVRETLQKKVLVVSVAEITFDTSVYSQLP---GQEAFMRAQMEMVLEEDEVY-------- 1127

  Fly  1080 DTSIPWLIIILG-IVGGLLLLALVTYVLWKVGFFKRIRPTDPTLSGNLEKMNEEKP 1134
             .:||   ||:| .||.||||||:|..|:|:|||||          :.::|.|:||
Human  1128 -NAIP---IIMGSSVGALLLLALITATLYKLGFFKR----------HYKEMLEDKP 1169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mewNP_001285196.1 Int_alpha 48..111 CDD:214549
Int_alpha 317..368 CDD:214549 21/59 (36%)
Int_alpha 378..428 CDD:214549 22/52 (42%)
Int_alpha 446..491 CDD:214549 11/50 (22%)
Integrin_alpha2 480..1006 CDD:462478 103/574 (18%)
ITGADXP_011544137.1 vWA_integrins_alpha_subunit 149..324 CDD:238746
Int_alpha 464..>506 CDD:214549 18/41 (44%)
Int_alpha 528..583 CDD:214549 22/54 (41%)
Int_alpha 593..>625 CDD:214549 9/33 (27%)
Integrin_alpha2 628..>933 CDD:462478 77/396 (19%)
Integrin_alpha 1153..1167 CDD:459778 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.

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