DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mew and Itga7

DIOPT Version :9

Sequence 1:NP_001285196.1 Gene:mew / 32275 FlyBaseID:FBgn0004456 Length:1243 Species:Drosophila melanogaster
Sequence 2:XP_030100775.1 Gene:Itga7 / 16404 MGIID:102700 Length:1180 Species:Mus musculus


Alignment Length:1268 Identity:359/1268 - (28%)
Similarity:551/1268 - (43%) Gaps:310/1268 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PNCRLRQNLGILIILQCVLT------CYNFNLEQRLPIVKYGHPHSHFGYSVATHTIGEANGPNK 69
            |.|...:..||..::..:|.      ...|||:....|.|.|.|.|.||:|||.|   ....|..
Mouse     5 PRCDFLRPPGIYYLITSLLAGLFLPPAIAFNLDVMGAIRKEGEPGSLFGFSVALH---RQLQPRP 66

  Fly    70 TNCVLVGAPLD---QNRQPNTTHSGALWRCPMTQRFDDCEQVITDGRRNFDSEILSPPGNDEIKE 131
            .:.:|||||..   ..:|.|.|  |.|:.||::....||.:|..|...|...         |.||
Mouse    67 QSWLLVGAPQALALPGQQANRT--GGLFACPLSLEETDCYRVDIDRGANVQK---------ESKE 120

  Fly   132 DQWMGVTVRSNPLQANGSGGKVIVCAHRYMYIVR-----ENRYGQGLCYLLTNDLQFEEVHEP-- 189
            :||:||:|||     .|.|||::.|||||....|     |.|...|.|::|:.||...:..:.  
Mouse   121 NQWLGVSVRS-----QGPGGKIVTCAHRYESRQRVDQALETRDVIGRCFVLSQDLAIRDELDGGE 180

  Fly   190 ---CKGRPVQRQHEDYGLCQAGTSAALL-DDDTMVLGSPGPYTWRGSIWVT-------------- 236
               |:|||  :.||.:|.||.||:|... |...:|.|:||.|.|:|:..|.              
Mouse   181 WKFCEGRP--QGHEQFGFCQQGTAATFSPDSHYLVFGAPGTYNWKGTARVELCAQGSPDLAHLDD 243

  Fly   237 ---QVGGEYLQRDK------TTYYS-------DHSDLN-------SPVDKY----------SYLG 268
               :.|||..|..:      .:|..       |.||.:       .|.|:.          ||||
Mouse   244 GPYEAGGEKEQDPRLIPVPANSYLGLLFVTNIDSSDPDQLVYKTLDPADRLTGPAGDLTLNSYLG 308

  Fly   269 MSVTGGRFF---GHMSYAAGAPRSEGHGQVVIFDKSTDNPIPVHSILDGEQFGSSFGYELATADI 330
            .|:..|:..   ..:|:.|||||:...|.|||..|.:.:.:....:|.||:..|.|||.||..|:
Mouse   309 FSIDSGKGLMRSEELSFVAGAPRANHKGAVVILRKDSASRLIPEVVLSGERLTSGFGYSLAVTDL 373

  Fly   331 NGDHRPDLIVAAPLYFTKTE--GGAVYVYQN----IQDTLPMKYTLKLTGPLESRFGLALANIGD 389
            |.|...||||.||.:|.:.|  |||||||.|    ..|..|    |::.|..:|.||::||.:||
Mouse   374 NNDGWADLIVGAPYFFERQEELGGAVYVYMNQGGHWADISP----LRICGSPDSMFGISLAVLGD 434

  Fly   390 LNKDNCEDLAVGAPYEGNGVVYIYLGSSQGLNSKPAQKIQASELGGTIPNGQPIRTFGISISGNT 454
            ||:|...|:|||||::|:|.|:||.|||.|:..||:|.::...:|        |::||.|:||..
Mouse   435 LNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVVKPSQVLEGEAVG--------IKSFGYSLSGGL 491

  Fly   455 DLDDNSYPDVVIGAFNSSAAVILLARPIISIQTSVQRKELHNMDPNT-----PGCLDDPASNLTC 514
            |:|.|.|||:::|:...:|| :..|||::.:...:      .:||..     |.|.|   ..|.|
Mouse   492 DVDGNHYPDLLVGSLADTAA-LFRARPVLHVSQEI------FIDPRAIDLEQPNCAD---GRLVC 546

  Fly   515 FTFRACCS-IEPYDEKNKELRLAYSVEAETFDHLK-KFSRVFFFDR--ENKRTNVLSRVVRVHTN 575
            ...:.|.| :......:..:.|.|.::.:|...|: :..||.|..|  ::.|......|...|.:
Mouse   547 VDIKICFSYVAVPSSYSPSVALDYMLDGDTDRRLRGQVPRVTFLSRGLDDLRHQSSGTVWLKHQH 611

  Fly   576 GRTECQAVTGYIKANTRDIQTPVRFRLKYSLVEPPLADSA----LVRLNPILD-------QTQAH 629
            .|. |......::.|.:|....:...|.|.|..|||...|    |..:.|||:       :|:.|
Mouse   612 DRV-CGDTVFQLQENVKDKLRAIVVTLSYGLRTPPLGRQAPGQELPTVAPILNAHQPSTQRTEIH 675

  Fly   630 VDFEGTFQKDCGDDDLCESNLIIRVEPNITESSGNEYTLI---LD----------ETELEVRINV 681
            .     .::.||:|.:|:|||.:......:..|..|:..:   ||          :..:.:.:.|
Mouse   676 F-----LKQGCGEDKICQSNLQLERYQFCSRISDTEFQALPMDLDGRTALFALSGQPFIGLELTV 735

  Fly   682 SNL----------ADSAYEAQLFIAHQAGVSYV------ATKKPTNATCNSYNT-TLVACSLGNP 729
            :||          .|.|:||||.:...|.:.|.      :.:||   .|.|.:: :.|.|.||||
Mouse   736 TNLPSDPARPQADGDDAHEAQLLVTLPASLRYSGVRALDSVEKP---LCLSNDSASHVECELGNP 797

  Fly   730 MLR--DTTTFVTIRFQPKGLEPSE---KIMLFHIFANTTSKLVGPERPERDLRVNVVRRAKLNFR 789
            |.|  ..|.::.:......:|.:|   |::|    |..:.:.:.|.    .:|.:|.....|:..
Mouse   798 MKRGAQVTFYLILSTSGITIETTELEVKLLL----ATISEQELDPV----SVRAHVFIELPLSIS 854

  Fly   790 GWAIPEQSFYSGSSVANSVANTAATDIEGHGPMGMD-DVGSQVHHMFTIFNEGPS--TAPKVQMV 851
            |.|.|:|.|:||             :::|...|..: ||||:|.:..|:.|:|.|  |.....:.
Mouse   855 GVATPQQLFFSG-------------EVKGESAMRSERDVGSKVKYEVTVSNQGQSLNTLGSAFLN 906

  Fly   852 IHWPYSLYSDPQSGRPVQYLLYLEQVPTVEVSQGECHVAKEYVNPLNLASGSRENPAYLSAPAQM 916
            |.||:.:.:.       ::|||..:   ||:..|:....:...:|       |.|...|..    
Mouse   907 IMWPHEIANG-------KWLLYPMR---VELEGGQGPGKRGICSP-------RPNILQLDV---- 950

  Fly   917 RMFPSQSRHSFNKSLIHSQRSYYSSSHRDDHSDDTQSNRNRVRRSFLERVTRLERLMYDPESS-- 979
                                                .:|:|.||...:...:......:|.:|  
Mouse   951 ------------------------------------DSRDRRRRELGQPEPQEPPEKVEPSTSWW 979

  Fly   980 NAANGKKQDIVELDCNKGATNCVRIECDILNMPALSEAQVV-VKARLWNSTLVSEYPRVERVRIF 1043
            ..::.:|:: |.|||.:|...||...|.:.   :...|.|: |..||||||.:.||..|:     
Mouse   980 PVSSAEKRN-VTLDCAQGTAKCVVFSCPLY---SFDRAAVLHVWGRLWNSTFLEEYMAVK----- 1035

  Fly  1044 STATAQIPESYGVEVMDHNNIEVETRAYPELRN-QQRDTS------------------IPWLIII 1089
                       .:||:...||.|::    .::| ..||.|                  :||.:|:
Mouse  1036 -----------SLEVIVRANITVKS----SIKNLLLRDASTVIPVMVYLDPMAVVVEGVPWWVIL 1085

  Fly  1090 LGIVGGLLLLALVTYVLWKVGFFKRIRPTDPTL 1122
            |.::.|||:|||:..:|||:|||||.:..:.|:
Mouse  1086 LAVLAGLLVLALLVLLLWKLGFFKRAKHPEATV 1118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mewNP_001285196.1 Int_alpha 48..111 CDD:214549 24/65 (37%)
Int_alpha 317..368 CDD:214549 27/56 (48%)
Int_alpha 378..428 CDD:214549 28/49 (57%)
Int_alpha 446..491 CDD:214549 17/44 (39%)
Integrin_alpha2 479..1006 CDD:285619 130/586 (22%)
Itga7XP_030100775.1 Int_alpha 48..109 CDD:214549 24/65 (37%)
Int_alpha 304..355 CDD:214549 17/50 (34%)
Int_alpha 362..415 CDD:214549 27/56 (48%)
Int_alpha 421..473 CDD:214549 28/51 (55%)
Int_alpha 483..>523 CDD:214549 17/40 (43%)
Integrin_alpha2 515..1005 CDD:369878 130/586 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832043
Domainoid 1 1.000 130 1.000 Domainoid score I5179
eggNOG 1 0.900 - - E1_KOG3637
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 385 1.000 Inparanoid score I2011
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46425
OrthoDB 1 1.010 - - D325432at33208
OrthoFinder 1 1.000 - - FOG0001200
OrthoInspector 1 1.000 - - otm43629
orthoMCL 1 0.900 - - OOG6_102503
Panther 1 1.100 - - LDO PTHR23220
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2587
SonicParanoid 1 1.000 - - X929
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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