DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mew and Itga9

DIOPT Version :10

Sequence 1:NP_001285196.1 Gene:mew / 32275 FlyBaseID:FBgn0004456 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_598482.2 Gene:Itga9 / 104099 MGIID:104756 Length:1036 Species:Mus musculus


Alignment Length:1196 Identity:320/1196 - (26%)
Similarity:521/1196 - (43%) Gaps:258/1196 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 FNLEQRLPIVKYGHPHSHFGYSVATHTIGEANGPNKTNCVLVGAPLDQNRQPNTTHS-GALWRCP 97
            :||:.:.|:...|...|.|||:|..|.      .:.|..||||||...::...:..| ||:::|.
Mouse    31 YNLDAQRPVRFQGPSGSFFGYAVLEHF------HDNTRWVLVGAPKADSKYSTSVKSPGAVFKCR 89

  Fly    98 MTQRFD-DCEQV-ITDGRRNFDSEILSPPG----NDEIKEDQWMGVTVRSNPLQANGSGGKVIVC 156
            :....| .|.:: :..||...     :|.|    .|  ::|:||||::...|    .:.|:|:.|
Mouse    90 VHTNPDRRCTELDMARGRTRG-----APCGKTCRGD--RDDEWMGVSLARQP----RADGRVLAC 143

  Fly   157 AHRY--MYIVRENRYGQGLCYLLTNDLQFE-EVHEPCKGRPVQRQHEDYGLCQAGTSAALLDDDT 218
            |||:  :|...::....|.|||:.::||.: :|..||.....::..|::|.||||. |....::.
Mouse   144 AHRWKNIYYEADHILPHGFCYLIPSNLQAKGKVLIPCYEEYKKKYGEEHGSCQAGI-AGFFTEEL 207

  Fly   219 MVLGSPGPYTWRGSIWVTQVGGEYLQRDKTTYY--SDHSDLNSPVDKYSYLGMSVTGGRFFGHMS 281
            :|:|:||.:.|.|::.|       |.....||:  :|.:.:|.   :|:|||.:||.|. |.|.|
Mouse   208 VVMGAPGSFYWAGTLKV-------LNLTDNTYFKLNDEAIMNR---RYTYLGYAVTAGH-FSHPS 261

  Fly   282 ---YAAGAPRSEGHGQVVIF--DKSTDNPIPVHSILDGEQFGSSFGYELATADINGDHRPDLIVA 341
               ...|||:.||.|:|.||  |:.:...|.:.. ..|::.||.||..|...|:|.|...||:|.
Mouse   262 ITDVVGGAPQDEGIGKVYIFRADRRSGTLIKIFQ-ASGKKMGSYFGSSLCAVDLNMDGLSDLLVG 325

  Fly   342 APLYFTKTEGGAVYVYQNIQDTLPMKYTLKLTG--PLESRFGLALANIGDLNKDNCEDLAVGAPY 404
            ||::....:.|.|.||.| |....::..|.|||  ...:.||.::||:||::.|...|:|||||.
Mouse   326 APMFSEIRDEGQVTVYLN-QGHGALEEQLTLTGDAAYNAHFGESIANLGDIDDDGFPDVAVGAPK 389

  Fly   405 EGN--GVVYIYLGSSQGLNSKPAQKIQASELGGTIPNGQPIRTFGISISGNTDLDDNSYPDVVIG 467
            |.:  |.||||.|.:.|:..|.:.|:....|..|      :|.||.||||..|:|.|.||||.||
Mouse   390 EEDFAGAVYIYHGDANGIVPKYSMKLSGRRLNPT------LRMFGQSISGGIDMDGNGYPDVTIG 448

  Fly   468 AFNSSAAVILLARPIISIQTSVQRKELHNMDPNTPGCLD--DPAS--NLT-CFTFRACCSIEPYD 527
            ||.|.:.|:|.|||:|::..|:......|:  ..|.|.|  .|.:  |:| ||.|..        
Mouse   449 AFLSDSVVLLRARPVITVDVSIFLPGSINI--TAPQCHDGQQPVNCLNVTVCFRFHG-------- 503

  Fly   528 EKN--KELRLAYSVEAETFDHLK-KFSRVFFFDRENKRTNVLSRVVRVHTNGRTECQAVTGYIKA 589
             ||  .|:.|.|::.|:.....| :..||:|.........|..|:...|.:  ..|.....::|.
Mouse   504 -KNVPGEIGLNYNLTADVAQKEKGQLPRVYFVLFGETAGQVSERLQLSHMD--EVCHHYVAHVKR 565

  Fly   590 NTRDIQTPVRFRLKYSLVEPPLA--DSALVRLNPIL-----------DQTQAHVDFEGTFQKDCG 641
            ..:|:.:|:.|...|||.|..:.  |..|..|.|:|           :||        .|:::|.
Mouse   566 RVQDVISPIVFEAAYSLDEHVMGEEDRELPDLTPVLRWKKGQRISQKNQT--------VFERNCQ 622

  Fly   642 DDDLCESNLIIRVEPNITESSGNEYT--LILDETE-LEVRINVSNLADSAYEA--------QLFI 695
            .:| |.::|.:|  ..:..||.:|.|  |.|...: :.:.|::|||.|.||:|        :||.
Mouse   623 SED-CAADLQLR--GKLLLSSVDEKTPHLALGAVKNISLNISISNLGDDAYDANVSFNVSRELFF 684

  Fly   696 AHQAGVSYVATKKPTNATCNSYNTTLVACSLGNPMLRDTTTF-VTIRFQPKGLEPSEKIMLFHIF 759
            .:      :..|:....:|....:..:.||:|.|.:|..:.: .::.|....|...|:|:.|.:.
Mouse   685 IN------MWQKEEMGISCELLESDFLKCSVGFPFMRSKSKYEFSVIFDTSHLSGEEEILSFIVT 743

  Fly   760 ANTTSKLVGPERPER------DLRVNVVRRAKLNFRGWAIPEQSFYSGSSVANSVANTAATDIEG 818
            |.:.:.    ||.|.      .|.|.:|.....:..|...| .||..|.||      .|:..|: 
Mouse   744 AQSGNL----ERSEALHDNTLTLTVPLVHEVDTSITGIVSP-TSFVYGESV------DASNFIQ- 796

  Fly   819 HGPMGMDDVGSQVHHM-----FTIFNEGPSTAPKVQMVIHWPYSLYSDPQSGRPVQYLLYLEQVP 878
                 :||  .:.|..     ..::|.||||.|...:.|.:|..|  .|....       :.||.
Mouse   797 -----LDD--QECHFQPVNITLQVYNMGPSTLPGSSVSISFPSRL--SPGGAE-------MFQVQ 845

  Fly   879 TVEVSQ--GECHVAKEYVNPLNLASGSRENPAYLSAPAQMRMFPSQSRHSFNKSLIHSQRSYYSS 941
            .:.|||  |.|.:              :.||.....|.:            .:::.|:..:::|.
Mouse   846 DMVVSQEKGNCSL--------------QRNPTPCIIPQE------------QENIFHTIFAFFSK 884

  Fly   942 SHRDDHSDDTQSNRNRVRRSFLERVTRLERLMYDPESSNAANGKKQDIVELDCNKGATNCVRIEC 1006
            |                                         |:|    .|||.|..:.|:.:.|
Mouse   885 S-----------------------------------------GRK----VLDCEKPGSFCLTLHC 904

  Fly  1007 DILNMPALSEAQVVVKARLWNSTLVSEYPRVERVRIFSTATAQIPESYGVEVMDHNNIEVETRAY 1071
            ::..:|. .|::.:....|.|:.::.: .....::..:.|..::..:..|..:.:.|.|.....:
Mouse   905 NLSALPK-EESRTINLYMLLNTEILKK-DSSSVIQFMARAKVKVEPALRVVEIANGNPEETLVVF 967

  Fly  1072 PELRN-QQRDTSIPWLIIILGIVGGLLLLALVTYVLWKVGFFKRIRPTDPTLSGNLEKMNEEKPF 1135
            ..|.| :.|...:.| ||.:.::.|:|:..|:..:|||:|||:|                ..|..
Mouse   968 EALHNLEPRGYVVGW-IIAISLLVGILIFLLLAVLLWKMGFFRR----------------RYKEI 1015

  Fly  1136 LAPSKNTHHVFXQEGTVGWDLVRRRR 1161
            :...||      :|...|||.|::.:
Mouse  1016 IEAEKN-----RKENEDGWDWVQKNQ 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mewNP_001285196.1 Int_alpha 48..111 CDD:214549 19/65 (29%)
Int_alpha 317..368 CDD:214549 19/50 (38%)
Int_alpha 378..428 CDD:214549 22/51 (43%)
Int_alpha 446..491 CDD:214549 25/44 (57%)
Integrin_alpha2 480..1006 CDD:462478 126/571 (22%)
Itga9NP_598482.2 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 36..97 20/66 (30%)
Int_alpha 45..102 CDD:214549 19/62 (31%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 109..175 22/76 (29%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 183..233 16/57 (28%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 234..290 22/59 (37%)
Int_alpha 245..295 CDD:214549 21/50 (42%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 291..350 21/60 (35%)
Int_alpha 301..348 CDD:214549 19/47 (40%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 352..409 25/56 (45%)
Int_alpha 362..415 CDD:214549 22/52 (42%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 412..475 29/68 (43%)
Int_alpha 426..>467 CDD:214549 24/40 (60%)
Integrin_alpha2 461..904 CDD:462478 126/571 (22%)
GFFKR motif. /evidence=ECO:0000250|UniProtKB:Q13797 1006..1010 3/3 (100%)

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