DRSC/TRiP Functional Genomics Resources

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Protein Alignment sno and sbno2a

DIOPT Version :9

Sequence 1:NP_001096967.1 Gene:sno / 32273 FlyBaseID:FBgn0265630 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_001232891.1 Gene:sbno2a / 100330841 ZFINID:ZDB-GENE-100629-3 Length:1350 Species:Danio rerio


Alignment Length:1467 Identity:603/1467 - (41%)
Similarity:809/1467 - (55%) Gaps:330/1467 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 GGAIGSTSSYLNSLTTNELMNLAAYVAAKGSNAPPPPPPSTAANSVRHSPTGGI---PNPGGNFF 269
            |..:..|.|::|.    :|.::..:...:..:.....|.:....|:..||:..:   |.|.|  |
Zfish    66 GRQLQPTPSFMNL----DLSDIDFHELVRNGDFSQELPCTDEVASLFSSPSDSLLEYPEPSG--F 124

  Fly   270 GGSAAASTSASAANFNMAASLLAQMSYAGGASQIRALKVAGNIGGVGNNQKPPPIATTPGSGGPA 334
            |..:                 |||::..|.|:|     :..:|  .|::|:|..::..||     
Zfish   125 GTDS-----------------LAQLTGEGPAAQ-----MYWDI--PGHSQRPLNLSAFPG----- 160

  Fly   335 GGAPGSGVKGNNSMMEAVQKLIAMNPEYLTSGIPNTVFQMFMQSMQRPQATPSPNQPMNPGAMVT 399
                               :|..:|                                    |:::
Zfish   161 -------------------RLDELN------------------------------------AILS 170

  Fly   400 SAAAAAAHASAVAYVQQEEDEVD---YEEMGVAETYADYWPAKLKLGKKHPDAVVETASLSSVEP 461
            .:.|....|:|.|...:||:|.|   .||:|.|:|||:|.|:|..:|..|||.||||.:||||.|
Zfish   171 PSVAGFKAAAAPAPPPEEEEEADDEETEELGHADTYAEYKPSKSTIGISHPDIVVETNTLSSVPP 235

  Fly   462 CDVYYKLSLPLETINSGHLSALQLESITYASQAHDHLLPDGSRAGFLIGDGAGVGKGRTIAGIIY 526
            .|:.|.||:|..|:::|.|||||||:|.||.|.|:.:|.:..|||||||||||||||||:.|||.
Zfish   236 PDITYTLSIPDSTVSTGLLSALQLEAIIYACQQHEVILQNSQRAGFLIGDGAGVGKGRTVIGIIL 300

  Fly   527 ENYLKGRKKALWISVSNDLKYDAERDLSDIGATRIEVHALNKFKYAKISSDVNNNCKRGVIFSTY 591
            ||:|||||:|||.|.||||||||||||.||.|..|.|.||||.||...::      ..||:|:||
Zfish   301 ENFLKGRKRALWFSASNDLKYDAERDLKDIDAPNIPVFALNKIKYGDTAT------SEGVLFATY 359

  Fly   592 SALIGESNNKTGKYRSRFRQLLQWCGEDFEGLIIFDECHKAKNLCPVGSGKPTKTGQTVLELQQK 656
            ||||||| ...|::|:|.:|:|.||...|:|:|:|||||||||      ...||.|:.||:||.|
Zfish   360 SALIGES-QAGGQHRTRLKQILDWCKPSFDGVIVFDECHKAKN------ATSTKMGKAVLDLQSK 417

  Fly   657 LPKARVVYASATGASEPKNMAYMVRLGLWGQGTAFGNFNDFITAVERRGVGAMEIVAMDMKLRGM 721
            ||:|||||||||||||||||.||.|||:|||||.|..|:||:.|:|:||||||||||||||:.||
Zfish   418 LPRARVVYASATGASEPKNMIYMSRLGIWGQGTPFKTFDDFLHAIEKRGVGAMEIVAMDMKVSGM 482

  Fly   722 YIARQLSFKGVSFKIEEVPLSKEFRKIYDQSVELWVEAMQKFTEAAELIDAESRMKKTMWGQFWS 786
            ||||||||.||||:|||:.|.:||:.:|:::..||.||::.|..||:.:...||  |::||||||
Zfish   483 YIARQLSFSGVSFRIEEIALDEEFKLVYNKAARLWAEALELFNRAADTLGLASR--KSLWGQFWS 545

  Fly   787 SHQRFFKYLCIAAKVNHAVLVARESIKYGKCVVIGLQSTGEARTLDQLERDDGELTDFVSTAKGV 851
            |||||||||||||||...|.:|...::.|||:||||||||||||.:.|:.:||.|..|:|.|:.|
Zfish   546 SHQRFFKYLCIAAKVRRLVDLAHMEMQQGKCIVIGLQSTGEARTREVLDENDGHLDKFISAAERV 610

  Fly   852 FQSFVERHFPA--PDRNRINRILGLYDETPSLSSVADSTSSLSNNSNITTAAGKRKGSNNNDNRS 914
            |||.|::|||.  |.|.:                               :||.|||  .....|.
Zfish   611 FQSLVQKHFPTQKPKREK-------------------------------SAANKRK--RKPRGRP 642

  Fly   915 TKIKKKKRSGSWECSDSEDENTDMKRNRKRDGGNSNSDSDEANSDDDLKSDIDDEDEDHDVDSDQ 979
            :|..|::.........|:|               |:|||||.:|:                    
Zfish   643 SKFPKQRVEVGGVIKISDD---------------SDSDSDEFDSE-------------------- 672

  Fly   980 RSVASDASSDFNPFFSGSDSDIDPWVNARSKKSKKAQKKSKKKVKKEKTKKEITTSSATDPSGST 1044
                |::|.:     |..|:|...:||                                      
Zfish   673 ----SNSSPE-----SLQDNDDVIFVN-------------------------------------- 690

  Fly  1045 AMSATVVAALNAVKNRKSQLSTQDKIQDLLQKKQELKGTVTPVGVNGVKLNYGPPPKDAIERACT 1109
                                                       .:||        |...:|.   
Zfish   691 -------------------------------------------HING--------PAAKLEE--- 701

  Fly  1110 MKEELLRKIERLGARLPPNTLDQLIDELGGPDNVAEMTGRRGRVVQTDDGSIQYESRTESDVPLE 1174
            :|:.||.:|..||..||.||||:|||..|||:.|:|||||:||||:..|||::||||.|..:.::
Zfish   702 LKQRLLHRIAELGKELPLNTLDELIDRFGGPEKVSEMTGRKGRVVRRPDGSVRYESRAEQGLTID 766

  Fly  1175 TLNITEKQRFMDGEKDVAIISEAASSGISLQSDRRVFNQRRRVHITLELPWSADRAIQQFGRTHR 1239
            .:|:.||:|||.|||.:||||||||||||||:|:||.|:|||||:||||||||||||||||||||
Zfish   767 HVNVREKERFMSGEKLIAIISEAASSGISLQADKRVQNRRRRVHMTLELPWSADRAIQQFGRTHR 831

  Fly  1240 SNQVNAPEYIFLISDLAGERRFASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRQALET 1304
            ||||.|||||||||:|||||||||.||||||||||||||||||||:|||||:|.:||||.:||:.
Zfish   832 SNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSQYNFENKYGTKALDK 896

  Fly  1305 VMRTIMGYESPLVPPPTDYSG---EFFKDIAGALVGVGIIVNSESHPGVLSLDKDYNNISKFLNR 1366
            :.:.|:|:....||||..|.|   .||:|:...::.|||.. .|...| |:.:||. .::|||||
Zfish   897 ITKAILGHIDNKVPPPKGYPGGGLMFFRDMKKGMIDVGIFC-KEPRMG-LNTEKDC-TLTKFLNR 958

  Fly  1367 ILGCPVDLQNRLFKYFTDTMTAIIQQAKRGGRFDLGILDLGAAGENVTRVRLIRFVRKHATGVAP 1431
            |||..|..||.||:|||:....:|::.|:.|::|:|||||....:.:......:|:    |...|
Zfish   959 ILGLEVHHQNFLFQYFTENFDYLIEKDKKEGKYDMGILDLAPGNDEIHEETQEKFL----TPGNP 1019

  Fly  1432 TE----MHTVRVERGMIWQEAIDKYADLFNENEGFYLSHQLRNQKRTAIMVVILESRNSSSTSST 1492
            .|    ::.:.|:|||.|:||..|...|..:.||||||::||..:...::......||       
Zfish  1020 QEGQVILYKISVDRGMPWKEACSKAEKLTGDYEGFYLSNKLRGSQPCVLLAEQGRGRN------- 1077

  Fly  1493 TDLDSGSKKKKTHSKKEIMCQIYRPNTGLQVRHESLFELEKKYRKVASEEAEPHWTEQYDASVNT 1557
                               ..:|:||.|.|...|:|..|..:|.||..|:|:..|..|:|.|...
Zfish  1078 -------------------LILYKPNIGKQAHPENLDNLLLRYYKVLPEDAKDVWESQFDFSFTN 1123

  Fly  1558 CSHAYWNGNCRNVSLGNDCEVGLRQRLYHVLAGSVLSVWGRVEHILNTRSNSK-MQVIRMKTTEG 1621
            ||||.|.|.|:.:..|.:|.:|:|.|.||:|.|::|.||.||..|::..:||. :|::|:||.:.
Zfish  1124 CSHANWKGKCKQIEEGQECFLGMRLRQYHMLCGALLRVWKRVSDIVSDITNSSILQIVRLKTKQN 1188

  Fly  1622 EKIVGTLIPKSCFEPLVADL-RSDSE------KQEEF 1651
            .|.||..||::|...:.|:| |.|.|      ::|:|
Zfish  1189 SKQVGIKIPENCVSRVRAELSRMDEEVKKARREREQF 1225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snoNP_001096967.1 AAA_34 448..751 CDD:290583 193/302 (64%)
Helicase_C_4 1128..1405 CDD:290582 175/279 (63%)
sbno2aNP_001232891.1 AAA_34 222..512 CDD:290583 193/302 (64%)
Helicase_C_4 720..997 CDD:290582 175/279 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593971
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59957
OrthoDB 1 1.010 - - D112455at33208
OrthoFinder 1 1.000 - - FOG0002373
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102140
Panther 1 1.100 - - O PTHR12706
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1569
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.860

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