DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sno and sbno1

DIOPT Version :9

Sequence 1:NP_001096967.1 Gene:sno / 32273 FlyBaseID:FBgn0265630 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_017945924.1 Gene:sbno1 / 100170149 XenbaseID:XB-GENE-479411 Length:1410 Species:Xenopus tropicalis


Alignment Length:1451 Identity:747/1451 - (51%)
Similarity:955/1451 - (65%) Gaps:183/1451 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 AASTSASAANFNMAASLLAQMSYAGGAS----------------QIRALKVAGNIGGVGNNQKPP 322
            |.|.|.|..:....||:|.|...|..||                ||..|...||...:..|   .
 Frog    45 AVSISGSGISKENEASVLKQEPLATSASALLNVRPPSTTTFVLNQINQLPTLGNTIVMTKN---T 106

  Fly   323 PIATT-----------------PGSGGPAGGAPGSGVKGNNSMM-------EAVQKLIAMNPEYL 363
            |:.||                 |.:..|......:.|...:.:.       .::.||:.:.|   
 Frog   107 PVTTTRQTITVTKILQTNSTTRPSTAAPVVQTTVAAVPSKDQIQLKDLLKTSSLNKLMKLKP--- 168

  Fly   364 TSGIPNTVFQMFMQSMQRPQATPSPNQPMNPGAMVTSAAA------------------------- 403
                |:.:.|        |.||.:....::|..:..:.:|                         
 Frog   169 ----PSNIAQ--------PVATAAKFLILSPKVVCPTKSADLPNGAKKDISKEVTRIWINEDIKM 221

  Fly   404 -AAAHASAVAYVQQEE-DEVDYEEMGVAETYADYWPAKLKLGKKHPDAVVETASLSSVEPCDVYY 466
             :.:..:.|...:.|| :|.|.:|||.|||||:|.|.|||:|.:|||.||||:|||||.|.||::
 Frog   222 RSFSPTNKVPVKEDEEPEEEDEDEMGHAETYAEYMPIKLKVGLRHPDPVVETSSLSSVTPPDVWF 286

  Fly   467 KLSLPLETINSGHLSALQLESITYASQAHDHLLPDGSRAGFLIGDGAGVGKGRTIAGIIYENYLK 531
            :.::|.|||::|.|||||||::|||:|.|:..||:|.||||||||||||||||||||||:||||.
 Frog   287 QTTIPEETIDNGWLSALQLEAVTYAAQQHETFLPNGERAGFLIGDGAGVGKGRTIAGIIFENYLL 351

  Fly   532 GRKKALWISVSNDLKYDAERDLSDIGATRIEVHALNKFKYAKISSDVNNNCKRGVIFSTYSALIG 596
            .||::||.||||||||||||||.||||..|:||:||||||.||||..|.:.|:||||:|||:|||
 Frog   352 SRKRSLWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIG 416

  Fly   597 ESNNKTGKYRSRFRQLLQWCGEDFEGLIIFDECHKAKNLCPVGSGKPTKTGQTVLELQQKLPKAR 661
            ||.: .|||::|.:|||.||||||:|:|:|||||||||||||||.||||||..|||||.||||||
 Frog   417 ESQS-GGKYKTRLKQLLHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKAR 480

  Fly   662 VVYASATGASEPKNMAYMVRLGLWGQGTAFGNFNDFITAVERRGVGAMEIVAMDMKLRGMYIARQ 726
            ||||||||||||:|||||.|||:||:||.|..|||||.|||||||||||||||||||||||||||
 Frog   481 VVYASATGASEPRNMAYMSRLGIWGEGTPFREFNDFIQAVERRGVGAMEIVAMDMKLRGMYIARQ 545

  Fly   727 LSFKGVSFKIEEVPLSKEFRKIYDQSVELWVEAMQKFTEAAELIDAESRMKKTMWGQFWSSHQRF 791
            |||.||:||||||||..::.|:|::||:|||.|.::|.:||:|||||.||||:|||||||:||||
 Frog   546 LSFTGVTFKIEEVPLGHDYVKMYNKSVKLWVLARERFQQAADLIDAEQRMKKSMWGQFWSAHQRF 610

  Fly   792 FKYLCIAAKVNHAVLVARESIKYGKCVVIGLQSTGEARTLDQLERDDGELTDFVSTAKGVFQSFV 856
            |||||||:||...|.:|||.||.|||||||||||||||||:.||...|||.||||||:||.||.:
 Frog   611 FKYLCIASKVRRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTARGVLQSLI 675

  Fly   857 ERHFPAPDRNRINRILGLYDETPSLSSVADSTSSLSNNSNITTAAGKRKGSNNNDNRSTKIKKKK 921
            |:|||||||.::..:||:           |.::..:|||           ..::.::.:|:||:|
 Frog   676 EKHFPAPDRKKLFSLLGI-----------DLSAQSNNNS-----------PRDSPSKDSKVKKRK 718

  Fly   922 RSGSWECSDSEDENTDMKRNRKRDGGNSNSDSDEANSDDDLKSDIDDEDEDHDVDSDQ-RSVASD 985
                     .|:...:.|:.|| .||.:.|      |.||:.|:.|..::|...:|:. :||:|.
 Frog   719 ---------GEELLREAKKPRK-SGGLAGS------SSDDMGSESDTSEKDAGSESESFKSVSSG 767

  Fly   986 ASSDFNPF--FSGSDSDIDPWVNARSKKSKKAQKKSKKKVKKEKTKKEITTS--SATDPSGSTAM 1046
            ...|||||  .|..|.:.|||:..:..|..|.:||.||.:..:..:..:..|  .:..||.|:.:
 Frog   768 DDDDFNPFRDESSEDEEDDPWLIRKDHKKNKHKKKKKKSIDPDSIQSALLASGLGSKRPSFSSVV 832

  Fly  1047 SATVVAALNAVKNRKSQLSTQDKIQDLLQKKQELKGTVTPVGVNGVKL-NYGPPPKDAIERACTM 1110
            .|...:....                          |..|..:|...: |.....:||:|||..|
 Frog   833 KAAATSTTTT--------------------------TSVPAPLNNTNVSNSCVTSQDAVERAQQM 871

  Fly  1111 KEELLRKIERLGARLPPNTLDQLIDELGGPDNVAEMTGRRGRVVQTDDGSIQYESRTESDVPLET 1175
            |:|||.|:|.|...|||||||:|||||||||||||||||:||||..|||||.||||:|.|||:|.
 Frog   872 KKELLDKLENLAEALPPNTLDELIDELGGPDNVAEMTGRKGRVVSNDDGSISYESRSELDVPVEI 936

  Fly  1176 LNITEKQRFMDGEKDVAIISEAASSGISLQSDRRVFNQRRRVHITLELPWSADRAIQQFGRTHRS 1240
            ||||||||||||||::||||||||||||||:|||..|||||||:|||||||||||||||||||||
 Frog   937 LNITEKQRFMDGEKNIAIISEAASSGISLQADRRAKNQRRRVHMTLELPWSADRAIQQFGRTHRS 1001

  Fly  1241 NQVNAPEYIFLISDLAGERRFASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRQALETV 1305
            |||.||||:||||:||||:||||.||||||||||||||||||||:||||:||.||||||.|||.|
 Frog  1002 NQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATESRDLSRFNFDNKYGRNALEIV 1066

  Fly  1306 MRTIMGYESPLVPPPTDYSGEFFKDIAGALVGVGIIVNSESHPGVLSLDKDYNNISKFLNRILGC 1370
            |::|:..:||||.||.::.|:||||:...|:|||:| |.|...|:|:||||||||.||||||||.
 Frog  1067 MKSIVSLDSPLVSPPPEFPGDFFKDVRQGLIGVGLI-NVEDRSGILTLDKDYNNIGKFLNRILGM 1130

  Fly  1371 PVDLQNRLFKYFTDTMTAIIQQAKRGGRFDLGILDLGAAGENVTRVRLIRFVRKHATGVAPTEMH 1435
            .|..||.||:||:||::|:||.||:.||:|:||||||:..|.|.:....:|:....:.....|::
 Frog  1131 EVHQQNALFQYFSDTLSAVIQNAKKNGRYDMGILDLGSGDEKVRKSDAKKFLTPGYSTSGHVELY 1195

  Fly  1436 TVRVERGMIWQEAIDKYADLFNENEGFYLSHQLRNQKRTAIMVVILESRNSSSTSSTTDLDSGSK 1500
            |:.|||||.|::|...:|:....::|||||.|:||.|:|.|:|                      
 Frog  1196 TISVERGMSWEDATKIWAEQTGPDDGFYLSLQIRNNKKTGILV---------------------- 1238

  Fly  1501 KKKTHSKKEIMCQIYRPNTGLQVRHESLFELEKKYRKVASEEAEPHWTEQYDASVNTCSHAYWNG 1565
             |:.:.||::.. :||||||.|::.|:|.:|:|||:||.||:|:.||.|||.:|.:.|:||||.|
 Frog  1239 -KEINPKKKLFL-VYRPNTGKQLKLETLLDLKKKYKKVTSEDAQSHWKEQYISSADICTHAYWRG 1301

  Fly  1566 NCRNVSLGNDCEVGLRQRLYHVLAGSVLSVWGRVEHILNTRS--NSKMQVIRMKTTEGEKIVGTL 1628
            ||:..|||..||:|||.|.|:||.|||||||.:||.:|.:.|  |.|||::|::|.:|::|||.:
 Frog  1302 NCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLI 1366

  Fly  1629 IPKSCFEPLVADLRSDSEKQE 1649
            ||.:|...||..|.:..:.|:
 Frog  1367 IPANCVSSLVTLLSTSDQSQQ 1387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snoNP_001096967.1 AAA_34 448..751 CDD:290583 227/302 (75%)
Helicase_C_4 1128..1405 CDD:290582 210/276 (76%)
sbno1XP_017945924.1 AAA_34 268..570 CDD:372772 227/302 (75%)
Helicase_C_4 889..1165 CDD:372771 210/276 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 468 1.000 Domainoid score I451
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10055
Inparanoid 1 1.050 1357 1.000 Inparanoid score I137
OMA 1 1.010 - - QHG59957
OrthoDB 1 1.010 - - D112455at33208
OrthoFinder 1 1.000 - - FOG0002373
OrthoInspector 1 1.000 - - oto104134
Panther 1 1.100 - - LDO PTHR12706
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10047
SonicParanoid 1 1.000 - - X1569
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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