DRSC/TRiP Functional Genomics Resources

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Protein Alignment sno and sbno1

DIOPT Version :9

Sequence 1:NP_001096967.1 Gene:sno / 32273 FlyBaseID:FBgn0265630 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_001186845.1 Gene:sbno1 / 100005813 ZFINID:ZDB-GENE-080522-2 Length:1386 Species:Danio rerio


Alignment Length:1464 Identity:756/1464 - (51%)
Similarity:960/1464 - (65%) Gaps:206/1464 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 STSSYLNSLTTNELMNLAAYVAAKGSNAPPPPPPSTAANS--------VRHSPTGGIPNPGGNFF 269
            :|:..||.|  |:|.:|...|.:|         |||.:::        |.||     .:|...  
Zfish    79 TTTFVLNQL--NQLPSLGTIVVSK---------PSTGSSTRQTITVTKVLHS-----SSPAQR-- 125

  Fly   270 GGSAAASTSASAANFN----MAASLLAQMSY-AGGASQIRALKVAGNIGGVGNNQKPPPIATTPG 329
              |:|:.:..:||..|    ....||...|. :....::..||...:|.        ||:||..|
Zfish   126 --SSASPSVCTAAPANTEQIRLKDLLRSSSLKSSSLGELMKLKPPADIA--------PPVATATG 180

  Fly   330 SGGPAGGAPGSGVKGNNSMMEAVQK----LIAMNPEYLTSGIPNTVFQMFMQSMQRPQATPSPNQ 390
            :           .:.||.:.:.|..    .|.:|.:            |.|:|.          .
Zfish   181 T-----------TEVNNGLKKEVSSKDVARIWINDD------------MKMRSF----------S 212

  Fly   391 PMN--PGAMVTSAAAAAAHASAVAYVQQEEDEVDYEEMGVAETYADYWPAKLKLGKKHPDAVVET 453
            |:|  ||..                .::|.:|.:.||:|.|||||:|.|.|.::|.:|||.||||
Zfish   213 PVNKLPGMK----------------EEEEPEEEEEEELGHAETYAEYMPMKQRIGLRHPDPVVET 261

  Fly   454 ASLSSVEPCDVYYKLSLPLETINSGHLSALQLESITYASQAHDHLLPDGSRAGFLIGDGAGVGKG 518
            :|||||.|.||:|:||:|.|||:.|.|||||||::|||:|.|:..||:|.||.:|||||||||||
Zfish   262 SSLSSVNPPDVWYRLSIPEETIDRGWLSALQLEAVTYAAQQHETFLPNGDRAAYLIGDGAGVGKG 326

  Fly   519 RTIAGIIYENYLKGRKKALWISVSNDLKYDAERDLSDIGATRIEVHALNKFKYAKISSDVNNNCK 583
            ||||||||||||.|||::||.||||||||||||||.||||..|:||:||||||.||||..|.:.|
Zfish   327 RTIAGIIYENYLLGRKRSLWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVK 391

  Fly   584 RGVIFSTYSALIGESNNKTGKYRSRFRQLLQWCGEDFEGLIIFDECHKAKNLCPVGSGKPTKTGQ 648
            :||||:|||:|||||.: .|||::||:|||.|||:||:|:|:|||||||||:||:||.||||||.
Zfish   392 KGVIFATYSSLIGESQS-GGKYKTRFKQLLHWCGDDFDGVIVFDECHKAKNVCPIGSSKPTKTGL 455

  Fly   649 TVLELQQKLPKARVVYASATGASEPKNMAYMVRLGLWGQGTAFGNFNDFITAVERRGVGAMEIVA 713
            .|||||.||||||||||||||||||:|||||.|||:||:||.|..|.:||.||||||||||||||
Zfish   456 AVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFANFIQAVERRGVGAMEIVA 520

  Fly   714 MDMKLRGMYIARQLSFKGVSFKIEEVPLSKEFRKIYDQSVELWVEAMQKFTEAAELIDAESRMKK 778
            ||||||||||||||||.||:||||||||:.::.|:|:::|.|||.|.:||.:||:|:|||.||||
Zfish   521 MDMKLRGMYIARQLSFTGVTFKIEEVPLTLDYIKMYNKAVRLWVSAREKFQQAAQLMDAEQRMKK 585

  Fly   779 TMWGQFWSSHQRFFKYLCIAAKVNHAVLVARESIKYGKCVVIGLQSTGEARTLDQLERDDGELTD 843
            :|||||||:|||||||||||:||...|.:|||.:|.|||||||||||||||||:.||...|||.|
Zfish   586 SMWGQFWSAHQRFFKYLCIASKVRRVVQLAREDVKNGKCVVIGLQSTGEARTLEALEEGGGELND 650

  Fly   844 FVSTAKGVFQSFVERHFPAPDRNRINRILGLYDETPSLSSVADSTSSLSNNSNITTAAGKRKGSN 908
            ||||||||.||.||:|||||||.::..:||:     .||  |..|.|.:.|.  |...||::   
Zfish   651 FVSTAKGVLQSLVEKHFPAPDRQKLLSLLGI-----DLS--AKKTPSPAENK--TEQKGKKR--- 703

  Fly   909 NNDNRSTKIKKKKRSGSWECSDSEDENTDMKRNRKRDGGNSNSDSDEANSDDDLKSDIDDEDEDH 973
                   |:.:.|:              .:|:.|| .||.|.|.||:::|          ||.|.
Zfish   704 -------KVPESKK--------------HVKKARK-SGGLSGSSSDDSSS----------EDSDR 736

  Fly   974 DVDSDQ--RSVASDASSDFNPF--FSGSDSDIDPW-VNARSKKSK-KAQKKSKKKVKKEKTKKEI 1032
            |.:||.  :|::|....|||||  .|..|.:.||| :...||||| |..||.||.:..:..:..:
Zfish   737 DAESDDSFKSISSGDEDDFNPFKDDSSEDEEDDPWLIRKDSKKSKDKRNKKKKKSIDPDSIQSAL 801

  Fly  1033 TTSSATDPSGSTAMSATVVAALNAVKNRKSQLSTQDKIQDLLQKKQELKGTVTPVGVNGVKLNYG 1097
            ..|..    |:|..:.|.     .:|.....|:       :.:...|....||            
Zfish   802 LASGL----GTTRPTFTA-----PIKPANPTLA-------VAKSDPEESSCVT------------ 838

  Fly  1098 PPPKDAIERACTMKEELLRKIERLGARLPPNTLDQLIDELGGPDNVAEMTGRRGRVVQTDDGSIQ 1162
              .:||:|.|..||.:||.|:|.|...|||||||||||||||||||||||||:||||..|||||.
Zfish   839 --SQDAVEDAQRMKRDLLEKLELLAEDLPPNTLDQLIDELGGPDNVAEMTGRKGRVVSNDDGSIS 901

  Fly  1163 YESRTESDVPLETLNITEKQRFMDGEKDVAIISEAASSGISLQSDRRVFNQRRRVHITLELPWSA 1227
            ||||:|.|||:|.||:||||.||||:|::||||||||||||||:||||.|||||||:||||||||
Zfish   902 YESRSELDVPVEILNLTEKQTFMDGDKNIAIISEAASSGISLQADRRVKNQRRRVHMTLELPWSA 966

  Fly  1228 DRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFASTVAKRLESLGALTHGDRRATETRDLSQFN 1292
            ||||||||||||||||.||||:||||:||||:||||.||:||||||||||||||||||||||:||
Zfish   967 DRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAQRLESLGALTHGDRRATETRDLSRFN 1031

  Fly  1293 IDNKYGRQALETVMRTIMGYESPLVPPPTDYSGEFFKDIAGALVGVGIIVNSESHPGVLSLDKDY 1357
            .||||||.|||.||::|:..:||||.||.|:.|:|||:|...|:|||:| |.|...|||||||||
Zfish  1032 FDNKYGRNALEIVMKSIVSLDSPLVSPPADFDGDFFKEIRNGLIGVGLI-NVEDRSGVLSLDKDY 1095

  Fly  1358 NNISKFLNRILGCPVDLQNRLFKYFTDTMTAIIQQAKRGGRFDLGILDLGAAGENVTRVRLIRFV 1422
            |||.||||||||..|..||.||:||:||::|:||.||:.||:|:||||||:..|.|.:|.:.:|:
Zfish  1096 NNIGKFLNRILGMEVQQQNALFQYFSDTLSAVIQNAKKSGRYDMGILDLGSGDEKVKKVDVKKFL 1160

  Fly  1423 RKHATGVAPTEMHTVRVERGMIWQEAIDKYADLFNENEGFYLSHQLRNQKRTAIMVVILESRNSS 1487
            ....:.....|::||.|||||.|:||...:||....::|||:  |:||.|:.||:|         
Zfish  1161 TPGYSTSGHVELYTVSVERGMSWEEATHVWADQNGPDDGFYV--QVRNNKKIAILV--------- 1214

  Fly  1488 STSSTTDLDSGSKKKKTHSKKEIMCQIYRPNTGLQVRHESLFELEKKYRKVASEEAEPHWTEQYD 1552
                          |:.:.:|.:. .:||||.|.|.:.|:..:::|:.:||.|::|:.||.:||.
Zfish  1215 --------------KEVNPRKRLF-MVYRPNIGKQAKLETYTDIKKRSKKVLSDDAKQHWMDQYS 1264

  Fly  1553 ASVNTCSHAYWNGNCRNVSLGNDCEVGLRQRLYHVLAGSVLSVWGRVEHILNTRS--NSKMQVIR 1615
            .|.:.||||||.|||:..|:|..||:|||.|.|.||.|||||||.:||.:|.:.|  |.|||::|
Zfish  1265 CSADVCSHAYWRGNCKKASVGLQCEIGLRCRTYFVLCGSVLSVWTKVEGVLASVSGANVKMQIVR 1329

  Fly  1616 MKTTEGEKIVGTLIPKSCFEPLVADLRSDSEKQE 1649
            ::|.:|::|||.:||::|..|||..|.|..:.|:
Zfish  1330 LRTEDGQRIVGLIIPQNCVSPLVNILSSSDQSQQ 1363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snoNP_001096967.1 AAA_34 448..751 CDD:290583 226/302 (75%)
Helicase_C_4 1128..1405 CDD:290582 212/276 (77%)
sbno1NP_001186845.1 AAA_34 256..558 CDD:290583 226/302 (75%)
Helicase_C_4 867..1143 CDD:290582 212/276 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 468 1.000 Domainoid score I440
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10055
Inparanoid 1 1.050 1338 1.000 Inparanoid score I139
OMA 1 1.010 - - QHG59957
OrthoDB 1 1.010 - - D112455at33208
OrthoFinder 1 1.000 - - FOG0002373
OrthoInspector 1 1.000 - - oto38819
orthoMCL 1 0.900 - - OOG6_102140
Panther 1 1.100 - - LDO PTHR12706
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1569
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.980

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