back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Coq5 and Coq5

DIOPT Version :9

Sequence 1:	NP_001285193.1	Gene:	Coq5 / 32272	FlyBaseID:	FBgn0030460	Length:	301	Species:	Drosophila melanogaster
Sequence 2:	NP_080780.1	Gene:	Coq5 / 52064	MGIID:	1098643	Length:	327	Species:	Mus musculus

Alignment Length:	295	Identity:	156/295 - (52%)
Similarity:	197/295 - (66%)	Gaps:	34/295 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    35 GAESISGKEKT--THFGFQTVRESEKEQKVHEVFEQVANSYDVMNDAMSLGIHRVWKDVFVERLG 97
            |..|:|.:::.  |||||:||.|.||..||::|||.||..||:|||.|||||||.|||:.:.::.
Mouse    39 GTRSLSQEKRAAETHFGFETVSEGEKGSKVYQVFENVAKKYDLMNDMMSLGIHRAWKDLLIRKMH 103

  Fly    98 PTHGMRLLDMAGGTGDITFRYLRYLNNQPNPQQR--------------------------PSHVT 136
            |..|.:|||||||||||.||:|.|:..|...:||                          .|..|
Mouse   104 PLPGTQLLDMAGGTGDIAFRFLSYVQAQHQRRQRRQLRTQQNLSWEEIAKKYQNEEDSLGGSLAT 168

  Fly   137 VSDINQHMLNVGEERAKRLGLTTDQLSNCTVAWQCADAEKLPFPDASFTAYTIAFGIRNCTHVDK 201
            |.|||:.||.||:::|      .||.....:||...|||:|||.|.||..|||||||||.||:|:
Mouse   169 VCDINREMLKVGKQKA------LDQGHTAGLAWVLGDAEELPFDDDSFDVYTIAFGIRNVTHIDQ 227

  Fly   202 VLSEAYRVLQPGGRFMCLEFSHLTNETMQWLYDQYSFQVIPPMGQLLAGQWQAYQYLVESIRRFP 266
            .|.||:|||:|||||:||||..:.:..:..|||.|||||||.:|:::||.|::|||||||||:||
Mouse   228 ALQEAHRVLKPGGRFLCLEFGQVNDPLISRLYDLYSFQVIPVIGEVIAGDWKSYQYLVESIRKFP 292

  Fly   267 KQEQFKQMIEQAGFDQVSYENLTFGVVSIHSGFKL 301
            .||.||.|||.|||.:|:|||||.|:|:|||||||
Mouse   293 NQEDFKDMIEDAGFQRVTYENLTTGIVAIHSGFKL 327

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.