back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Coq5 and coq5

DIOPT Version :9

Sequence 1:	NP_001285193.1	Gene:	Coq5 / 32272	FlyBaseID:	FBgn0030460	Length:	301	Species:	Drosophila melanogaster
Sequence 2:	NP_001004541.1	Gene:	coq5 / 447802	ZFINID:	ZDB-GENE-040912-5	Length:	327	Species:	Danio rerio

Alignment Length:	330	Identity:	166/330 - (50%)
Similarity:	214/330 - (64%)	Gaps:	49/330 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 RLLSLARRFVH----------TRTASQSAQNSKGMASGAESISGKEKTTHFGFQTVRESEKEQKV 62
            |:||.:.|.:|          .|.|:.:|:  :|.:...|.     ::||||||||.|.||.:||
Zfish    11 RVLSDSTRNIHHVLRCRSKYLCRRAAITAR--RGYSDSTEG-----RSTHFGFQTVPEEEKAEKV 68

  Fly    63 HEVFEQVANSYDVMNDAMSLGIHRVWKDVFVERLGPTHGMRLLDMAGGTGDITFRYLRYLNNQPN 127
            ::|||.||..||||||||||||||:|||..:..:.|..|:||||.|||||||:||:|.|..:..:
Zfish    69 YKVFESVAKKYDVMNDAMSLGIHRLWKDTLLHIMNPQPGLRLLDTAGGTGDISFRFLEYTRSMYD 133

  Fly   128 PQQR--------------------------PSHVTVSDINQHMLNVGEERAKRLGLTTDQLSNCT 166
            .|||                          .|...|.|||:.||.||::||:..|:||.
Zfish   134 RQQRLRAKSQQTPSWKDIAGHYVSDEEGPPQSRAVVCDINKEMLKVGKQRAEDAGITTG------ 192

  Fly   167 VAWQCADAEKLPFPDASFTAYTIAFGIRNCTHVDKVLSEAYRVLQPGGRFMCLEFSHLTNETMQW 231
            ::|...|||:|||.|..|..|||||||||.||:::.|.||:|||:|||||||||||.:||..:..
Zfish   193 LSWVAGDAEELPFDDDQFDMYTIAFGIRNVTHIEQALQEAFRVLKPGGRFMCLEFSKVTNPLLAR 257

  Fly   232 LYDQYSFQVIPPMGQLLAGQWQAYQYLVESIRRFPKQEQFKQMIEQAGFDQVSYENLTFGVVSIH 296
            |||.||||:||.:|:::||.|::|||||||||:||.||.||:|||.|||.:|.|.|||.|:|:||
Zfish   258 LYDAYSFQMIPVLGEVIAGDWKSYQYLVESIRKFPDQEIFKEMIEDAGFFRVQYFNLTGGIVAIH 322

  Fly   297 SGFKL 301
            |||||
Zfish   323 SGFKL 327

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.