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Protein Alignment Coq5 and Coq5

DIOPT Version :9

Sequence 1:	NP_001285193.1	Gene:	Coq5 / 32272	FlyBaseID:	FBgn0030460	Length:	301	Species:	Drosophila melanogaster
Sequence 2:	NP_001034111.1	Gene:	Coq5 / 304542	RGDID:	1310857	Length:	327	Species:	Rattus norvegicus

Alignment Length:	299	Identity:	154/299 - (51%)
Similarity:	199/299 - (66%)	Gaps:	34/299 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    31 GMASGAESISGKEKT--THFGFQTVRESEKEQKVHEVFEQVANSYDVMNDAMSLGIHRVWKDVFV 93
            |....|.|:|.:::.  |||||:||.|.||..||::||:.||..||:|||.|||||||.|||:.:
  Rat    35 GATLSARSLSQEKRAAETHFGFETVSEKEKGGKVYQVFQSVARKYDLMNDMMSLGIHRAWKDLLI 99

  Fly    94 ERLGPTHGMRLLDMAGGTGDITFRYLRYLNNQPNPQQR--------------------------P 132
            .::.|..|.:|||:|||||||.||:|.|:..|...:||                          .
  Rat   100 RKMHPLPGTQLLDVAGGTGDIAFRFLSYVQTQHERKQRRQLRTRQNLSWEEIARKYQSKEDPLGG 164

  Fly   133 SHVTVSDINQHMLNVGEERAKRLGLTTDQLSNCTVAWQCADAEKLPFPDASFTAYTIAFGIRNCT 197
            |.|.|.|||:.||.||:::|...|.|..      :||...|||:|||.|..|..|||||||||.|
  Rat   165 SLVMVCDINREMLKVGKQKALARGHTAG------LAWVLGDAEELPFDDDRFDVYTIAFGIRNVT 223

  Fly   198 HVDKVLSEAYRVLQPGGRFMCLEFSHLTNETMQWLYDQYSFQVIPPMGQLLAGQWQAYQYLVESI 262
            |:|:.|.||:|||:|||||:|||||.:.:..:..|||.|||||||.:|:::||.|::||||||||
  Rat   224 HIDRALQEAHRVLKPGGRFLCLEFSQVNDPLISRLYDLYSFQVIPVIGEVIAGDWKSYQYLVESI 288

  Fly   263 RRFPKQEQFKQMIEQAGFDQVSYENLTFGVVSIHSGFKL 301
            |:||.||:||.|||.|||.:|:||:||.|:|:|||||||
  Rat   289 RKFPNQEEFKDMIEDAGFQKVTYESLTSGIVAIHSGFKL 327

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.