DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12096 and Psmd5

DIOPT Version :9

Sequence 1:NP_001285190.1 Gene:CG12096 / 32269 FlyBaseID:FBgn0030457 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001100039.2 Gene:Psmd5 / 296651 RGDID:1308434 Length:504 Species:Rattus norvegicus


Alignment Length:531 Identity:137/531 - (25%)
Similarity:243/531 - (45%) Gaps:90/531 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KLKALESKPQ--------------RLDAL-TAMNSAIAKEAALPRQIIERLLTTDQLYDCANPAA 60
            :|:||:|..|              ||..| :.:|....::.||...|:||||             
  Rat    21 ELRALQSVVQAVPLHELREQAAELRLRPLFSLLNQNNREQTALCVSILERLL------------- 72

  Fly    61 DSHVPKDQAVDVTLELLCHCLDQLAMDTADEQLSSLLRRGLTHSNPALRAQVLASLFKKLLRQLT 125
                   |||:.     .|....|.:|         |:|||||.:.:::...|:.:.:.:.....
  Rat    73 -------QAVEP-----IHLARNLRLD---------LQRGLTHPDDSVKTLTLSQIGRIVEDSEA 116

  Fly   126 VGQVLTLPNNELIFLILDELKQPDTQSTSLAINILSIVLPQRISNADVQA--------KLVQLLK 182
            |.:||:  |.||:..::..:...:......||..||.:   .::.|.::|        .|..::|
  Rat   117 VTEVLS--NAELLRQVVCCIGGENLSVAKAAIKSLSRI---SLTQAGLEALFESNLLDDLKNVMK 176

  Fly   183 QNEIVRCRAYELAVVLAKKSATLLSDVTF--ILDAALSELDNDDVLLQASVMELLVPLAEQNHGL 245
            .|::||.|.|||.:.::..|:..|:..|.  ::...|.||..:|||::|:.:|::..||..:||.
  Rat   177 TNDVVRYRVYELIIDISSVSSESLNYCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHGR 241

  Fly   246 SYMERRRVLDIISYRVQRVEEHPLDALLVPSIMKFFGKISVY-QPLKIIGGYPHMLACLFMQLQS 309
            .|:.:..|:|.||..:...:..|.....:|..:||||.::|. .|.:|...||..|..:|....|
  Rat   242 QYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKVFAMADS 306

  Fly   310 EDESILPTAMDTLANLATTPQGKILLNMHFSGA-MEKSFKKYGSHTKKLSAHIKKRLLNSL-DVI 372
            :|.:::..|:||:..|.::.:||.:|..  :|. .|:...:.|...|..|..:|.|.|::: .::
  Rat   307 QDPTMIGVAVDTVGILGSSVEGKQVLQK--TGTRFERLLTRIGYQAKNASTELKIRCLDAVSSLL 369

  Fly   373 YDFKTPPATEIINIGKNWY--------ECFAGGAHANIIMDLINTPFPDLQMAALSFLKTICKYN 429
            |........:.:.:.::|:        |.|.|         :.|.|||:|..|||.....|....
  Rat   370 YLSPEQQTDDFLGMTESWFSSVSRDSLELFRG---------ISNQPFPELHCAALKVFTAIANQP 425

  Fly   430 WGIVALKNTGGAVEFLLSRQKDLHRDIKYMKWQIMEILSAS---AE-FSPTETIRFTAYVNEGPY 490
            |....:.|:.|.|||::.|..:..:..|..|:::::.|:.|   || |..:..:|...|::||||
  Rat   426 WAQKLMFNSPGFVEFVMDRSVEHDKTSKDAKYELVKALANSKTVAEIFGNSNYLRLRTYLSEGPY 490

  Fly   491 HVQADLDVATE 501
            :|:.....|.|
  Rat   491 YVKPVATTAVE 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12096NP_001285190.1 Proteasom_PSMB 4..502 CDD:287479 137/531 (26%)
Psmd5NP_001100039.2 Proteasom_PSMB 1..504 CDD:371102 137/531 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338300
Domainoid 1 1.000 149 1.000 Domainoid score I4314
eggNOG 1 0.900 - - E1_KOG4413
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37999
Inparanoid 1 1.050 149 1.000 Inparanoid score I4303
OMA 1 1.010 - - QHG59237
OrthoDB 1 1.010 - - D240962at33208
OrthoFinder 1 1.000 - - FOG0008750
OrthoInspector 1 1.000 - - oto96922
orthoMCL 1 0.900 - - OOG6_104314
Panther 1 1.100 - - LDO PTHR13554
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

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