DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap60 and RSC6

DIOPT Version :10

Sequence 1:NP_511143.2 Gene:Bap60 / 32268 FlyBaseID:FBgn0025463 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_009981.1 Gene:RSC6 / 850419 SGDID:S000000648 Length:483 Species:Saccharomyces cerevisiae


Alignment Length:445 Identity:92/445 - (20%)
Similarity:160/445 - (35%) Gaps:133/445 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 LLTFERKLDATIMRKRLDIQEALKRPMKQKRK--------LRIFISNTFYPSKEPTNDG---EEG 205
            |:..:.:||..:.|:|||  .::..|...|.|        |||::.||  ....|.:|.   .:.
Yeast    36 LIEMDSRLDLYLTRRRLD--TSINLPTNTKTKDHPPNKEMLRIYVYNT--TESSPRSDSGTPADS 96

  Fly   206 AVASWELRVEGRLL-EDGKGDPNTKIKRKFSSFFKSLVIEL--------------DKELYGP--- 252
            ...:|.||:||:|| |...|      |..||.|.:.:.::.              |..|..|   
Yeast    97 GKTTWTLRIEGKLLHESANG------KHPFSEFLEGVAVDFKRLKPLGMGKKRKRDSSLSLPLNL 155

  Fly   253 ---------------DN----------------HLVEW-HRTHTTQETDGFQVKRPGDRNVRCTI 285
                           ||                ..:|| :..:...|.||..:||.|..|:||:|
Yeast   156 QQPEYNDQDSTMGDNDNGEDEDSAEAESREEIVDALEWNYDENNVVEFDGIDIKRQGKDNLRCSI 220

  Fly   286 LLLL---DYQPLQFKLDPRLARLLGVHTQTRPVIISALWQYIKTHKL------------------ 329
            .:.|   |...:|:  .|.||.|:|:.|.:....:.::::||..:.|                  
Yeast   221 TIQLRGVDGGKVQY--SPNLATLIGMQTGSVNDAVYSIYKYILINNLFVTEQTEAQDGSNDAEDS 283

  Fly   330 ---------------------QDAHEREYINCDKYLEQIF--SCQRMKFAEIPQRLNPLLHPPDP 371
                                 :|..|...:..|..|:::.  :...:....:.|.:|.|:.|..|
Yeast   284 SNENNNKNGAGDDDGVEGSTPKDKPELGEVKLDSLLQKVLDTNAAHLPLMNVVQTVNKLVSPLPP 348

  Fly   372 IVINHFIESGAENKQTA-CYDIDV-------EVDDTLKNQMNSFLMSTASQQEIQGLDTKIHETV 428
            |::::.|:...:....| ..|:||       :....|:.:..:....||..:||..|..:     
Yeast   349 IILDYTIDLSKDTTYGATTLDVDVSHILHQPQPQPNLQKEEETDAEDTAKLREITKLALQ----- 408

  Fly   429 DTINQMKTNREFFLSFAKDP-QMFIHRWIISETRDLKLMTDVAGNPEEERRAEFY 482
              :|......:||...:..| :...|....|:..:|.|..|...|.:..|.::.|
Yeast   409 --LNSSAQKYQFFHELSLHPRETLTHYLWSSKQNELVLQGDQYFNEDAARTSDIY 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap60NP_511143.2 SWIB_BAF60A 295..371 CDD:349493 18/116 (16%)
RSC6NP_009981.1 SWIB-MDM2 234..>272 CDD:476812 9/39 (23%)

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