Protein Alignment Bap60 and Smarcd1

DIOPT Version :10

• Sequence 1: NP_511143.2
• Gene: Bap60 / 32268
• FlyBaseID: FBgn0025463
• Length: 515
• Species: Drosophila melanogaster
• Sequence 2: NP_001102222.1
• Gene: Smarcd1 / 363002
• RGDID: 1305406
• Length: 515
• Species: Rattus norvegicus
• Alignment Length: 539
• Identity: 342/539 - (63%)
• Similarity: 385/539 - (71%)
• Gaps: 72/539 - (13%)

  Fly     6 APGQAPVQSRYQP-----PP----PAPGMRPY--PPPGASFPPRGFPLHPNTTQPVPGTANVAGV 59
            |.|.|.|.:...|     ||    ||||...|  |.|||::|..|  :.|.:.....|.:  .|.
  Rat    18 ASGGAGVAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPRPG--MLPGSRMTPQGPS--MGP 78

  Fly    60 PGVPGVPGV---------------PGPSLLQRAAQQPGFQSSLRGTGAGGGGVGSGGGSKRSNES 109
            ||..|.|.|               |.|..:|:..||                    ....|::.:
  Rat    79 PGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQ--------------------AVQNRNHNA 123

  Fly   110 RSLGGGGSKSDFATAKKKKKLAEKILPQKVRDLVPESQAYMDLLTFERKLDATIMRKRLDIQEAL 174
                            ||||:|:|||||::|:||||||||||||.||||||.|||||||||||||
  Rat   124 ----------------KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEAL 172

  Fly   175 KRPMKQKRKLRIFISNTFYPSKEPTNDGEEGAVASWELRVEGRLLED---GKGDPNTKIKRKFSS 236
            |||:||||||||||||||.|:|....|| ||.|||||||||||||||   .|.|. ||.||||||
  Rat   173 KRPIKQKRKLRIFISNTFNPAKSDAEDG-EGTVASWELRVEGRLLEDSALSKYDA-TKQKRKFSS 235

  Fly   237 FFKSLVIELDKELYGPDNHLVEWHRTHTTQETDGFQVKRPGDRNVRCTILLLLDYQPLQFKLDPR 301
            |||||||||||:||||||||||||||.|||||||||||||||.|||||:||:|||||.|||||||
  Rat   236 FFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR 300

  Fly   302 LARLLGVHTQTRPVIISALWQYIKTHKLQDAHEREYINCDKYLEQIFSCQRMKFAEIPQRLNPLL 366
            ||||||:|||||||||.|||||||||||||.||||::.|||||:|||..|||||:||||||:.||
  Rat   301 LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALL 365

  Fly   367 HPPDPIVINHFIE-SGAENKQTACYDIDVEVDDTLKNQMNSFLMSTASQQEIQGLDTKIHETVDT 430
            .||:||:|||.|. ...:.|:|||||||||||||||.||||||:||||||||..||.|||||::|
  Rat   366 MPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIET 430

  Fly   431 INQMKTNREFFLSFAKDPQMFIHRWIISETRDLKLMTDVAGNPEEERRAEFYYQPWTHEAVSRYF 495
            |||:||.|||.||||:|||.||:.|:.|:.||||.||||.||||||||||||:|||..|||.|||
  Rat   431 INQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYF 495

  Fly   496 FTKVNQKRAELEQALGIRN 514
            ::||.|:|.||||||||||
  Rat   496 YSKVQQRRQELEQALGIRN 514

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Bap60	NP_511143.2	SWIB_BAF60A	295..371	CDD:349493	62/75 (83%)
Smarcd1	NP_001102222.1	SWIB_BAF60A	294..370	CDD:349493	62/75 (83%)