DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap60 and swsn-2.2

DIOPT Version :9

Sequence 1:NP_511143.2 Gene:Bap60 / 32268 FlyBaseID:FBgn0025463 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_491329.2 Gene:swsn-2.2 / 172018 WormBaseID:WBGene00015971 Length:449 Species:Caenorhabditis elegans


Alignment Length:505 Identity:234/505 - (46%)
Similarity:306/505 - (60%) Gaps:68/505 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QPPPPAPGMRPYPPPGASFPPRGFPLHPNTTQPVPGTANVAGVPGVPGVPGVPGPSLLQRAAQQP 81
            |.|.|.....||..||::         |...:|       .|..|.|  |.:.||.::...|   
 Worm     5 QRPNPQMNRHPYGTPGSA---------PQMRRP-------GGFAGQP--PQMHGPRMVAPPA--- 48

  Fly    82 GFQSSLRGTGAGGGGVGSGGGSKRSNESRSLGGGGSKSDFATAKKKKKLAEKILPQKVRDLVPES 146
                                                    |...||||.|:|.:..|:|:|.|::
 Worm    49 ----------------------------------------APLPKKKKYADKCIHPKIRELEPDA 73

  Fly   147 QAYMDLLTFERKLDATIMRKRLDIQEALKRPMKQKRKLRIFISNTFYPSKEPTNDGEEGAVASWE 211
            :.||.||..|:|||:|:.||:||||||||||.|.|::|||:||:||...|:|..|.:|.::..||
 Worm    74 ENYMALLASEQKLDSTLSRKKLDIQEALKRPSKVKKRLRIYISHTFIEEKQPEKDTDEASLPMWE 138

  Fly   212 LRVEGRLLEDGKGDP-----NTKIKRKFSSFFKSLVIELDKELYGPDNHLVEWHRTHTTQETDGF 271
            ||||||||::....|     ....||||||||||||||||||:||||.||||||||..|.|||||
 Worm   139 LRVEGRLLDEQPPAPAIPGQRPVPKRKFSSFFKSLVIELDKEMYGPDQHLVEWHRTPQTNETDGF 203

  Fly   272 QVKRPGDRNVRCTILLLLDYQPLQFKLDPRLARLLGVHTQTRPVIISALWQYIKTHKLQDAHERE 336
            ||||.|||.|:|.||||||..|.:|||.||||::||:.|:|||.||.|||||||||.|||..||:
 Worm   204 QVKRAGDRPVKCRILLLLDNHPAKFKLHPRLAKVLGIATETRPKIIEALWQYIKTHGLQDPQERD 268

  Fly   337 YINCDKYLEQIFSCQRMKFAEIPQRLNPLLHPPDPIVINHFIESGAENKQ--TACYDIDVEVDDT 399
            .||||.:|.|.|...||:|.|:|.:|:.||...||:..||.|:...|.::  :.|||||||::|.
 Worm   269 IINCDTFLSQCFGVNRMRFMEVPNKLHQLLQQTDPLEFNHIIQRPKEGQEQVSTCYDIDVEMEDP 333

  Fly   400 LKNQMNSFLMSTASQQEIQGLDTKIHETVDTINQMKTNREFFLSFAKDPQMFIHRWIISETRDLK 464
            :|..|::|:.|.....:||.||.|.::.::.||::||.|:|:..|..:|..||..|::|:..|||
 Worm   334 VKQFMHTFVHSPGLANDIQTLDQKCYDIIEQINELKTRRDFYARFYTEPAEFIKSWVMSQNSDLK 398

  Fly   465 LMTDVAGNPEEERRAEFYYQPWTHEAVSRYFFTKVNQKRAELEQALGIRN 514
            .|.:::|:.|.||.||.|.:|.|.|.|.||.|.||||||.||||:||:|:
 Worm   399 TMNELSGDLEAERFAESYVRPETEEGVQRYMFQKVNQKRHELEQSLGVRS 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap60NP_511143.2 SWIB_BAF60A 295..371 CDD:349493 44/75 (59%)
swsn-2.2NP_491329.2 SWIB-MDM2 227..303 CDD:422951 44/75 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161112
Domainoid 1 1.000 248 1.000 Domainoid score I1171
eggNOG 1 0.900 - - E1_COG5531
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20670
Inparanoid 1 1.050 484 1.000 Inparanoid score I795
Isobase 1 0.950 - 0 Normalized mean entropy S1727
OMA 1 1.010 - - QHG55104
OrthoDB 1 1.010 - - D1027566at2759
OrthoFinder 1 1.000 - - FOG0000716
OrthoInspector 1 1.000 - - otm14111
orthoMCL 1 0.900 - - OOG6_100964
Panther 1 1.100 - - O PTHR13844
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1401
SonicParanoid 1 1.000 - - X681
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1615.790

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