DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4332 and Clptm1

DIOPT Version :9

Sequence 1:NP_572861.1 Gene:CG4332 / 32267 FlyBaseID:FBgn0030456 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001099702.1 Gene:Clptm1 / 292696 RGDID:1310959 Length:664 Species:Rattus norvegicus


Alignment Length:504 Identity:178/504 - (35%)
Similarity:267/504 - (52%) Gaps:54/504 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 DQNFEHDFEVDVPLRTRRNGSLYLHVVLALEG---EPLEWRSLRRDGPTVVHTMSLTDYIVPRAE 140
            |..:||..|:|:|...::|||:|:||.....|   :|.: ::|.|...||..:..:..|...|.:
  Rat   143 DGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQ-KALYRRLATVHMSRMINKYKRRRFQ 206

  Fly   141 AFK--LLGDSEKGAAAAVQEKEKKKASTTG--RPSTHIRSNVYVTLLNDLYSVSQADVPPEMAPL 201
            ..|  |.|::|      ...:..|:|...|  ...:|...|:.:.:::|.....:..|||.:...
  Rat   207 KTKNLLTGETE------ADPEMIKRAEDYGPVEVISHWHPNITINIVDDHTPWVKGSVPPPLDQY 265

  Fly   202 IRVNR-NQQILPILQTDTFNTRLKDLVPVTRNTTEFTFSFHYKPVGVGKLRLMLLMEHATQALLT 265
            ::.:. :....||:..:.:....||..|:..:.........:.|:.:.:.:|     :|.|:..:
  Rat   266 VKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSLWRWQL-----YAAQSTKS 325

  Fly   266 ----IG-----FATKDIDEVKGIFSDTNVYLLCGTIFVSSIHMLFDFLSFKNDVAFWRKKQSYEG 321
                :|     .:.::.|.||....:|:.|||..||.||.:|.:|:||:||||:.||..:||.||
  Rat   326 PWNFLGDELYEQSDEEQDSVKVALLETSPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEG 390

  Fly   322 LSSRTTMWRAFSQIVIFFYLLDENTSYLVLVPVGLGTLIELWKCKKIFRLELSFSGLVRRKLEQV 386
            ||.|:..:..|...|:..|:||..|:::|.|.|.:|.||:|||..|:..:.|.            
  Rat   391 LSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVRLD------------ 443

  Fly   387 DRRNGDQAGV--------KSGQLAEEQKTDQFDRQGMRYLSYLLYPLCICGAVYSLLYQPHRSWY 443
              |....||:        ||..:  |..|..:|....||||::|:||..|.|||||||..|:.||
  Rat   444 --REHRVAGIFPCPTFRDKSTYI--ESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLYLEHKGWY 504

  Fly   444 SWTLNSLVNGVYAFGFLFMLPQLFVNYKLKSVAALPWRAFMYKAFNTFIDDFFAFIITMPTAHRV 508
            ||.|:.|...:..|||:.|.||||:||||||||.||||...|||.||||||.|||:|.||..:|:
  Rat   505 SWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRI 569

  Fly   509 ACLRDDIVFIIYLYQRWLYPVDKSRL-DTGLSISETPDTGNSSSASIAA 556
            .|||||:||.|||||||:|.||.:|: :.|:|..:.....:.:.||.||
  Rat   570 GCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGEDVSAAASGAQASTAA 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4332NP_572861.1 CLPTM1 10..435 CDD:283294 108/380 (28%)
Clptm1NP_001099702.1 CLPTM1 60..496 CDD:283294 108/380 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106937at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100901
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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