DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4318 and Znf740

DIOPT Version :9

Sequence 1:NP_572860.2 Gene:CG4318 / 32266 FlyBaseID:FBgn0030455 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_006242517.1 Gene:Znf740 / 685834 RGDID:1589052 Length:205 Species:Rattus norvegicus


Alignment Length:202 Identity:54/202 - (26%)
Similarity:86/202 - (42%) Gaps:41/202 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 CQSCALDAQTAYGMDSVQVIEQDEMVVSEM------NYEEEGSNDSDVELIEPVDGSQEME---T 108
            |:..|       |:..|......:|::|::      |.|..||.|       .:..|.:|:   .
  Rat     9 CEGLA-------GVSLVPTAASKKMMLSQIASKQAENGERAGSPD-------VLRCSSQMDCKPR 59

  Fly   109 IDLTIDSPGDNVENMCPNSNSNGNGNVSQSSAQKDTKKKM------------LKKTHKCNICGKY 161
            .||:  |.|.. ::...:.|...:..::::|..|.|.||:            :.|...|..|...
  Rat    60 FDLS--SKGHR-KDSDKSRNRKDDDTLAEASHSKKTVKKVVVVEQNGSFQVKIPKNFICEHCFGA 121

  Fly   162 FMLPAHLKCHMWVHAREKPYKCLQCSQSYAQIRGLRRHERVHSSRPELRSYKCSRCPKIFNRNSA 226
            |....|||.|:.:|..|||::|..|...:.|...|.||:||||..   :.|:|.||.:.|:|...
  Rat   122 FRSSYHLKRHVLIHTGEKPFECDVCDMRFIQKYHLERHKRVHSGE---KPYQCERCHQCFSRTDR 183

  Fly   227 LKNHETM 233
            |..|:.|
  Rat   184 LLRHKRM 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4318NP_572860.2 zf-AD 5..>64 CDD:285071 2/10 (20%)
C2H2 Zn finger 155..175 CDD:275368 7/19 (37%)
zf-H2C2_2 167..192 CDD:290200 10/24 (42%)
COG5048 <179..>236 CDD:227381 21/55 (38%)
C2H2 Zn finger 183..203 CDD:275368 7/19 (37%)
C2H2 Zn finger 214..234 CDD:275368 8/20 (40%)
Znf740XP_006242517.1 C2H2 Zn finger 115..135 CDD:275368 7/19 (37%)
zf-H2C2_2 127..152 CDD:290200 10/24 (42%)
C2H2 Zn finger 143..163 CDD:275368 7/19 (37%)
zf-H2C2_2 155..180 CDD:290200 12/27 (44%)
C2H2 Zn finger 171..189 CDD:275368 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344845
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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