DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4318 and Zscan4f

DIOPT Version :10

Sequence 1:NP_572860.2 Gene:CG4318 / 32266 FlyBaseID:FBgn0030455 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001103786.2 Gene:Zscan4f / 665902 MGIID:3708485 Length:506 Species:Mus musculus


Alignment Length:218 Identity:52/218 - (23%)
Similarity:86/218 - (39%) Gaps:33/218 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PKDPFPKTI------CQSCALDAQT-AYGMDSVQVIEQDEMVVSEMNYEEEGSNDSDVELIEPVD 101
            |||...:.|      |.:.:.:|.| .|..|::...:.|.:.:::..|..| ....|:....|.|
Mouse   263 PKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPE-PEVGDIPYGVPQD 326

  Fly   102 GSQEME-TIDLTIDSPGDNVENMCPNS------------------NSNGNGNVSQSSAQKDTKKK 147
            .::..: |.....:|.|:......|..                  ..|...|:...|.||...:.
Mouse   327 STRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRD 391

  Fly   148 MLKKTHKCNICGKYFMLPAHLKCHMWVHAREK-PYKCLQCSQSYAQIRGLRRHERVHSSRPELRS 211
              .|.:||..|.:.|.....|..|...|..:| ...|:.|.:.:.::...|.||.:|  .|| :.
Mouse   392 --AKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIH--MPE-KP 451

  Fly   212 YKCSRCPKIFNRNSALKNHETMH 234
            :|||.|.|.|:..:.||:||.:|
Mouse   452 FKCSTCEKSFSHKTNLKSHEMIH 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4318NP_572860.2 zf-AD 5..77 CDD:462262 10/39 (26%)
C2H2 Zn finger 155..175 CDD:275368 5/19 (26%)
C2H2 Zn finger 183..203 CDD:275368 5/19 (26%)
C2H2 Zn finger 214..234 CDD:275368 9/19 (47%)
Zscan4fNP_001103786.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
SCAN <51..117 CDD:153421
zf-C2H2 395..417 CDD:395048 6/21 (29%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
C2H2 Zn finger 426..446 CDD:275368 5/19 (26%)
zf-C2H2 452..474 CDD:395048 10/21 (48%)
C2H2 Zn finger 454..474 CDD:275368 9/19 (47%)
zf-H2C2_2 466..491 CDD:463886 5/9 (56%)
C2H2 Zn finger 482..500 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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