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Protein Alignment CG4318 and Zscan4d

DIOPT Version :9

Sequence 1:	NP_572860.2	Gene:	CG4318 / 32266	FlyBaseID:	FBgn0030455	Length:	236	Species:	Drosophila melanogaster
Sequence 2:	NP_001093656.1	Gene:	Zscan4d / 545913	MGIID:	3645954	Length:	506	Species:	Mus musculus

Alignment Length:	218	Identity:	51/218 - (23%)
Similarity:	87/218 - (39%)	Gaps:	33/218 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    44 PKDPFPKTI------CQSCALDAQT-AYGMDSVQVIEQDEMVVSEMNYEEEGSNDSDVELIEPVD 101
            |||...:.|      |.:.:.:|.| .|..|::...:.|.:.:::..|..| ..:.|:....|.|
Mouse   263 PKDLSRENISEDKNNCYNTSRNAATQVYRSDNIPRKKTDSLSINKRIYHSE-PEEGDIPYGVPQD 326

  Fly   102 GSQEME-TIDLTIDSPGDNVENMCPNS------------------NSNGNGNVSQSSAQKDTKKK 147
            .::..: |.....:|.|:......|..                  ..:...|:...|.||..::.
Mouse   327 STRASQGTSTCLQESLGECFSEKDPRELPGLESRQEEPISDPVFLGKDHEANLPCESHQKRFRRD 391

  Fly   148 MLKKTHKCNICGKYFMLPAHLKCHMWVHAREK-PYKCLQCSQSYAQIRGLRRHERVHSSRPELRS 211
              .|..||..|.:.|.....|..|...|..:| ...|:.|.:.:.::...|.||.:|  .|| :.
Mouse   392 --AKLFKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIH--MPE-KP 451

  Fly   212 YKCSRCPKIFNRNSALKNHETMH 234
            :|||.|.|.|:..:.||:||.:|
Mouse   452 FKCSTCEKSFSHKTNLKSHEMIH 474

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.