DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4318 and Zscan4f

DIOPT Version :9

Sequence 1:	NP_572860.2	Gene:	CG4318 / 32266	FlyBaseID:	FBgn0030455	Length:	236	Species:	Drosophila melanogaster
Sequence 2:	XP_578644.3	Gene:	Zscan4f / 503124	RGDID:	1563625	Length:	508	Species:	Rattus norvegicus

Alignment Length:	199	Identity:	51/199 - (25%)
Similarity:	86/199 - (43%)	Gaps:	22/199 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    53 CQSCALDAQTAYGMDSVQVIEQDEMVVSEMNYEEEGSNDSDVE-------LIEPVDGSQEMETID 110
            |.:.:.:|......|::.:.:.|.:.:::..|..| ....||.       ...|...:.:.|::.
  Rat   283 CCTTSKNATQENSADNIPMRKMDSVFINQRMYHPE-PKMGDVSCGVPQGFTRSPGTSTSQQESLG 346

  Fly   111 LTI--DSPGD--NVENMCPNSNSNGNGNVSQSSAQKDTKKKMLKKTH------KCNICGKYFMLP 165
            ||.  |.|.|  .|.:. |...|:....:.|:.....|.|...|:.|      .|..|.:.|...
  Rat   347 LTFSEDDPRDIPGVPSR-PEKLSSEAVLLYQNQEANSTSKSHQKRLHVGPKQYNCEECPRTFKYA 410

  Fly   166 AHLKCHMWVHAREKPYKCLQCSQSYAQIRGLRRHERVHSSRPELRSYKCSRCPKIFNRNSALKNH 230
            :||..|...|..:|.:.|..|.:::.:...||.||.:|:  || :.:|||.|.|.|:..:.||.|
  Rat   411 SHLSLHQRTHQNKKAFVCPTCQKTFKRASDLRCHEIIHN--PE-KPFKCSTCEKSFSHKTNLKAH 472

  Fly   231 ETMH 234
            |.:|
  Rat   473 ERIH 476

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4318	NP_572860.2	zf-AD	5..>64	CDD:285071	2/10 (20%)
		C2H2 Zn finger	155..175	CDD:275368	6/19 (32%)
		zf-H2C2_2	167..192	CDD:290200	7/24 (29%)
		COG5048	<179..>236	CDD:227381	21/56 (38%)
		C2H2 Zn finger	183..203	CDD:275368	6/19 (32%)
		C2H2 Zn finger	214..234	CDD:275368	9/19 (47%)
Zscan4f	XP_578644.3	SCAN	53..124	CDD:413396
		SFP1	<349..472	CDD:227516	36/126 (29%)
		zf-C2H2	398..420	CDD:395048	6/21 (29%)
		C2H2 Zn finger	400..420	CDD:275368	6/19 (32%)
		C2H2 Zn finger	428..448	CDD:275368	6/19 (32%)
		zf-C2H2	454..476	CDD:395048	10/21 (48%)
		C2H2 Zn finger	456..476	CDD:275368	9/19 (47%)
		C2H2 Zn finger	484..502	CDD:275368
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166344839
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930