DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15717 and gabD

DIOPT Version :10

Sequence 1:NP_572856.1 Gene:CG15717 / 32262 FlyBaseID:FBgn0030451 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_417147.1 Gene:gabD / 948060 ECOCYCID:EG11329 Length:482 Species:Escherichia coli


Alignment Length:181 Identity:40/181 - (22%)
Similarity:72/181 - (39%) Gaps:22/181 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PTAQETKLALIPSAP--------QWRSPQLMVVFEDGDLHSA--RHQLLQSLQNPFAEGSVATLL 77
            |..|..|..::...|        .|..|..|:..:.|...:|  ...|..:.|.||:..::|.|.
E. coli   132 PGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELA 196

  Fly    78 LQESIADQFVGLVAQDLRPLSQEVSKHP-----SYTSTL---AKIEELKAKTVQGESLK-AGESP 133
            ::..:......:|......:..|::.:|     |:|.:.   .::.|..||.::..||: .|.:|
E. coli   197 IRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 261

  Fly   134 VLVYDCVHSYLGNGATGVVTVHTFRTAKEAGQLAKRDPLPYGQVSLWNEKL 184
            .:|:|  .:.|.....|.: ...||.|.:....|.|..:..|....:.|||
E. coli   262 FIVFD--DADLDKAVEGAL-ASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15717NP_572856.1 DUF1487 38..250 CDD:254173 36/158 (23%)
gabDNP_417147.1 gabD 1..482 CDD:183050 40/181 (22%)

Return to query results.
Submit another query.