DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer3HCH and RGD1560203

DIOPT Version :9

Sequence 1:NP_572854.1 Gene:Fer3HCH / 32260 FlyBaseID:FBgn0030449 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_038956279.1 Gene:RGD1560203 / 302685 RGDID:1560203 Length:176 Species:Rattus norvegicus


Alignment Length:165 Identity:59/165 - (35%)
Similarity:98/165 - (59%) Gaps:4/165 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VRQNFAKSCEKKLNDQINMELKASHQYLAMAYHFDRSDISSPGMHRFFLKASVEEREHAEKIMTY 80
            ||||:.:.||:.:|..|.:.|:||:.||:||::|||.|::.....||||..|.:.:...|..:..
  Rat     8 VRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFM 72

  Fly    81 MNKRGGLIILSSVPQP-LPCFASTLDALKHAMKMELEVNKHLLDLHALAGKEADPNLCDFIEANF 144
            .|||||.:.|.|:.:| ...:.....|::.|.:||:.:|:.||:||.||..:.|.:||:|:..:.
  Rat    73 QNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHC 137

  Fly   145 LQEQVDGQKILADYISQLEK---AQNQVGEFLFDK 176
            |.:||...|.:..|::.|.:   .:..:.|:||||
  Rat   138 LDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDK 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer3HCHNP_572854.1 Euk_Ferritin 24..177 CDD:153114 55/157 (35%)
Ferritin 25..165 CDD:278632 49/143 (34%)
RGD1560203XP_038956279.1 Euk_Ferritin 16..173 CDD:153114 55/157 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 127 1.000 Domainoid score I5229
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 141 1.000 Inparanoid score I4396
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249457at2759
OrthoFinder 1 1.000 - - FOG0000169
OrthoInspector 1 1.000 - - otm46042
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11431
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X152
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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