DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXC10 and lbe

DIOPT Version :10

Sequence 1:NP_059105.2 Gene:HOXC10 / 3226 HGNCID:5122 Length:342 Species:Homo sapiens
Sequence 2:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster


Alignment Length:451 Identity:95/451 - (21%)
Similarity:152/451 - (33%) Gaps:142/451 - (31%)


- Green bases have known domain annotations that are detailed below.


Human     1 MTCPRNVTPNSYAEPLAAPGGGE------------------RYSRSA--------GMYMQSGSDF 39
            |.||..:.|.|.||...:.||..                  ::.|::        .:.||..:  
  Fly     1 MLCPPTMRPASPAESEISVGGAPSPLPTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHA-- 63

Human    40 NCGVMRGCGLAPSLSKRDEGSSPSLALNTYPSYLSQLDSWGDPKAAYRLEQPVGRPLSSCSYPPS 104
             .........|..|::...|:.|              :.:..|....|:......|......|||
  Fly    64 -AAAAAAAAAASGLTRSAVGNLP--------------EDYFHPLKRLRMSSSSSEPRDHTPSPPS 113

Human   105 -----------------VKEENVCCM--YSAEKRAKS---GPEAALYSHPLPESCLGEHEVPV-P 146
                             ||..::..:  :|.::|.:|   .|.|.|.:.|...        |: |
  Fly   114 AVPEPQTNQTTKSAIEGVKSFSIADILGHSEKQREESVSPPPNANLLAPPASR--------PIAP 170

Human   147 SYYRASPSYSALDKTP------------------HCSGANDFEAPF--------EQRASL----- 180
            |.....|....||..|                  |..|......||        |||.:|     
  Fly   171 SGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQ 235

Human   181 -----NPRAEHLESPQLGGKVSFPETPKSD-----------SQTPSPNEIKTEQSLAGPKGSPSE 229
                 |.:|:.|....:...:...|...|:           ::..||.:.:..:.|...:|| .|
  Fly   236 LQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGS-EE 299

Human   230 SEKERAKAADSSPDTSDNEAKEEIKAENTT---------------GNWLTAKSGRKKRCPYTKHQ 279
            ::|::::...:....|:.:...:...:.||               .|....|..||.|..:|.||
  Fly   300 AQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQ 364

Human   280 TLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMNRENRIRELTSNFN 340
            ..||||.||:..||:...|.||:.::.|::.||..||||||.|.|:     .|.||..:|:
  Fly   365 IFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKR-----DIEELKKDFD 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXC10NP_059105.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 10/45 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..271 16/109 (15%)
Homeodomain 269..325 CDD:459649 27/55 (49%)
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 27/55 (49%)

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