DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXC10 and ftz

DIOPT Version :10

Sequence 1:NP_059105.2 Gene:HOXC10 / 3226 HGNCID:5122 Length:342 Species:Homo sapiens
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:294 Identity:82/294 - (27%)
Similarity:115/294 - (39%) Gaps:85/294 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    51 PSLSKR---DEGSSPSLALNTYPSYLSQLDSWGDPKAAYRLEQPVGRPLSSCSYPPSVKEENVCC 112
            |..:||   |:.:|...|:...||.|..|               :..|:....|.|..       
  Fly    84 PKATKRKAEDDAASIIAAVEERPSTLRAL---------------LTNPVKKLKYTPDY------- 126

Human   113 MYSAEKRAKSGPEAALYSHPLPESCLGEHEVPVPSY---YRASPSYSALDKTPHCSGANDFEAPF 174
            .|:..::.|..|..   |..:..|       |.|||   |...|:.||.:...:.    |..:|.
  Fly   127 FYTTVEQVKKAPAV---STKVTAS-------PAPSYDQEYVTVPTPSASEDVDYL----DVYSPQ 177

Human   175 EQRASLNPRAEHLESPQLGGKVSFPETPKSDSQTP---SPNEIKTEQSLAGPKGSPSESEKERAK 236
            .|...|.                     ..|..||   :|..:...:.::.|..||.|.      
  Fly   178 SQTQKLK---------------------NGDFATPPPTTPTSLPPLEGISTPPQSPGEK------ 215

Human   237 AADSSPDTSDNEAKEEIKAENTTG--NW--------LTAKSGRKKRCPYTKHQTLELEKEFLFNM 291
               ||...|.......:.|.|..|  ||        ...|..::.|..||::|||||||||.||.
  Fly   216 ---SSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNR 277

Human   292 YLTRERRLEISKTINLTDRQVKIWFQNRRMKLKK 325
            |:||.||::|:..::|::||:||||||||||.||
  Fly   278 YITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXC10NP_059105.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..271 17/96 (18%)
Homeodomain 269..325 CDD:459649 33/55 (60%)
ftzNP_477498.1 FTZ 1..248 CDD:397787 46/229 (20%)
Homeodomain 255..311 CDD:459649 33/55 (60%)
KLF1_2_4_N <321..404 CDD:425360
Blue background indicates that the domain is not in the aligned region.

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