DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXC10 and bsh

DIOPT Version :10

Sequence 1:NP_059105.2 Gene:HOXC10 / 3226 HGNCID:5122 Length:342 Species:Homo sapiens
Sequence 2:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster


Alignment Length:342 Identity:79/342 - (23%)
Similarity:118/342 - (34%) Gaps:88/342 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    51 PSLSKRDEGSSPSLALNTYPSYLSQLDSWGDPKAAYRLEQPVGRPLSSCSYPPSVKEENVCCMYS 115
            |:.||....:|.:..|.|              |..:.:|..:.:.|:|.|...:..:.|.....:
  Fly    23 PTHSKAAAMASATTMLTT--------------KTPFSIEHILFQNLNSASNNNNSSDTNGIAANT 73

Human   116 ---AEKRAKSGPEAAL---------YSHPLPESCLGEHEVPVPSYYRASPSYSALDKTPHCSGAN 168
               |.|.:::..::|.         :.||      .:|..|..|:..||.|.||.........|:
  Fly    74 NNYAPKSSRNAVKSARSAFAHDNNPHKHP------SQHSHPPQSHPPASASASATATARSNQAAS 132

Human   169 DFEA-PFEQRASLNPRAEHLE------------SPQLG-GKVSFPETPKSDSQTPSPNEIKTEQS 219
            .:.. .:.:.....||:.|..            |.||| |....|..|.:..|.|.|      ..
  Fly   133 GYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAAQHPPVPTTQPQPPPP------PP 191

Human   220 LAGPKG-------------------------SPSESEKE--------RAKAADSSPDTSDNEAKE 251
            |.|..|                         |||....:        :|.....:|.........
  Fly   192 LNGGSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVP 256

Human   252 EIKAENTTG-NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIW 315
            |:......| |.|.....||.|..::..|...|||.|....||:...|:|::..:.|::.|||.|
  Fly   257 ELALGLGMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTW 321

Human   316 FQNRRMKLKKM--NREN 330
            |||||||.||.  .|:|
  Fly   322 FQNRRMKHKKQLRRRDN 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXC10NP_059105.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..271 23/130 (18%)
Homeodomain 269..325 CDD:459649 24/55 (44%)
bshNP_477350.2 Homeodomain 275..331 CDD:459649 24/55 (44%)
Blue background indicates that the domain is not in the aligned region.

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