Protein Alignment Chpf and Chpf

DIOPT Version :10

• Sequence 1: NP_572853.2
• Gene: Chpf / 32259
• FlyBaseID: FBgn0263005
• Length: 819
• Species: Drosophila melanogaster
• Sequence 2: NP_001005906.1
• Gene: Chpf / 316533
• RGDID: 1359458
• Length: 770
• Species: Rattus norvegicus
• Alignment Length: 873
• Identity: 237/873 - (27%)
• Similarity: 388/873 - (44%)
• Gaps: 199/873 - (22%)

  Fly    16 IGLLLGLLLSWHIPEDIW-EEEC---PEEAAENLL--------------------IERFG--QEF 54
            :|:.||..||  :....| ||.|   |.:..::.|                    .||.|  :.:
  Rat    18 VGISLGFTLS--LLSVTWVEEPCGPGPPQPGDSELPPRGNTNAARRPNSVQPGAERERPGADESW 80

  Fly    55 EPHLNLINKPLAAKKPVKNVIRPRYYSSELGIREKLFIGVMTSQEHINTFATAFNRTTAHLVNKI 119
            ||.: |...|....:..|..:|.||.|:|||||:||.:.|:|||..:.|...|.|||..|
  Rat    81 EPRV-LPYHPAQPGQATKKAVRTRYISTELGIRQKLLVAVLTSQATLPTLGVAVNRTLGH----- 139

  Fly   120 KFFIYADSVKTNYKLKNIVGFTDTRESRRP----------------FHV-VKYIADNYLDEYDYF 167
                         :|:::|..|..|..|.|                .|: ::::.:.:.|::|:|
  Rat   140 -------------RLEHVVFLTGARGRRTPSGMAVVALGEERPIGHLHLALRHLLEQHGDDFDWF 191

  Fly   168 LLVPDTVYVDARKLVKLLYHMSI--TFDLYMGGARIGLDPSGGGASADGQSNEPPANEEEAPGAS 230
            .||||..|.:|..|.:|..|:|:  ...||:|..:   |..||               |..||
  Rat   192 FLVPDATYTEAHGLDRLTGHLSLASATHLYLGRPQ---DFIGG---------------ETTPG-- 236

  Fly   231 DRNYCSLEAGILLSSSVIRKMRNNLERCVR--IGSTSDHSVNIGRCVKYASRVAGCQESFQGMRQ 293
              .||....|:|||.::::::|.:||.|..  :.:..|..  :|||:..|:.: ||....:|| .
  Rat   237 --RYCHGGFGVLLSRTLLQQLRPHLESCRNDIVSARPDEW--LGRCILDATGI-GCTGHHEGM-H 295

  Fly   294 FSYALDAPGRRHREFSELAKEEAFRNASTVYPVQTPEDFYRLHAYYSKHHLEK----VQERGYAL 354
            ::|...:||...:|     .:..||:|.|.:||..|...|:||..:::..|::    :||..:.:
  Rat   296 YNYLELSPGEPVQE-----GDPRFRSALTAHPVHDPVHMYQLHKAFARAELDRTYQEIQELQWEI 355

  Fly   355 EQKSYRIANGSISNKILEIRWPLGVPPPSAPETRHDILTWQLLNGTHNF-LPNGNAEHAVATLSR 418
            :..|...|:|..::     .||:|:|.||.|.:|.::|.|......|.| ..:|:..   ..|..
  Rat   356 QNTSRLAADGERAS-----TWPVGIPAPSRPASRFEVLRWDYFTEQHTFSCADGSPR---CLLRG 412

  Fly   419 IEAQDFAKVLEIALQYAALKHP---RLSYHSLHSAYRKFDATRGMDYQLHLNLQEGSGRSRRL-V 479
            .:..|.|.||..||:....::.   ||....|.:.||:||..|||:|.|.|.|:..:.:..|. :
  Rat   413 ADQADVADVLGTALEELNRRYQPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRWPL 477

  Fly   480 IKSFEVVKPLGRVEVVPSPYVTESTRIAMLVPAFEHQVPDALLFVEQYERICMQNQDNTFLLLIF 544
            ....::::||.|||::|.|||||::|:.:|:|....:...|..|:|.:....::..|...|.|:.
  Rat   478 THRVQLLRPLSRVEILPVPYVTEASRVTVLLPLAAAECDLASGFLEAFATAALEPGDAAALTLLL 542

  Fly   545 MYR-LESPSKGDEDPFKALKTLALDLSSKYKTDGSRIAWVSIRLPEQLSEPVDPQSWLLHASMYG 608
            :|. .::......|.|..:|....:|..::  .|:|:.|:|:    |.|.|             .
  Rat   543 LYEPRQAQRAAHADVFAPVKAHVAELERRF--PGARVPWLSV----QTSAP-------------S 588

  Fly   609 PRQLLSLVVADLALPKLGLESLVLLATPGMVFKADFLNRVRMNTIQGFQVYAPIGFQMY------ 667
            |.:|:     ||...|..|::|.|||.|..|...|||||.||:.|.|:|.:.|:.||.:
  Rat   589 PLRLM-----DLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAP 648

  Fly   668 ------PCRWAHFCRECDTCDVSQSSGYFDRHNHDVIAFYSRDYVQARKLL---HPQGLPIIRSD 723
                  |             ::.:.:|:|||.......||:.|||.||..|   ..|...::.|
  Rat   649 PQGPGPP-------------ELGRDTGHFDRQAASEACFYNSDYVAARGRLVAVSEQEEELLES- 699

  Fly   724 LDIDQLLLQPGEETRPPGVESILDMFVAAQHSVHILRGVEPNLRFGQDVRNHLAR--GGTLPQSV 786
            ||:.:|.|:                    ..|:|:||.|||.|     ::.:.|:  ...|.:.:
  Rat   700 LDVYELFLR--------------------FSSLHVLRAVEPAL-----LQRYRAQPCSARLSEDL 739

  Fly   787 PERCGREQCIHLASRKQIGDAIIRYEDK 814
            ..||.:.....|.||.|:  |::.:|.:
  Rat   740 YHRCRQSVLEGLGSRTQL--AMLLFEQE 765

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Chpf	NP_572853.2	CHGN	254..804	CDD:461712	158/578 (27%)
Chpf	NP_001005906.1	Galactosyl_T	<190..>279	CDD:473923	24/92 (26%)
		CHGN	258..757	CDD:461712	142/525 (27%)