DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chpf and chpf

DIOPT Version :10

Sequence 1:NP_572853.2 Gene:Chpf / 32259 FlyBaseID:FBgn0263005 Length:819 Species:Drosophila melanogaster
Sequence 2:XP_031749638.1 Gene:chpf / 100379780 XenbaseID:XB-GENE-996754 Length:769 Species:Xenopus tropicalis


Alignment Length:864 Identity:245/864 - (28%)
Similarity:383/864 - (44%) Gaps:180/864 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VIGLLLGLLLSWHIPEDIW-EEEC----------------------------PEE---AAENLLI 47
            |:|:.||..||  :....| ||.|                            |..   ..||   
 Frog    17 VVGISLGFTLS--LLSVTWVEEPCSVGLRVSGGSGANSDSIHDRGNGNAARKPNSFPAGIEN--- 76

  Fly    48 ERFGQEFEPHLNLINKPLAAKKPVKNVIRPRYYSSELGIREKLFIGVMTSQEHINTFATAFNRTT 112
               .:.|||.: :...|...:|..|..:|.||.|:||||||:||:||:||:..:||.|.|.|||.
 Frog    77 ---AESFEPKI-IPYTPPDPQKVQKKPVRSRYISTELGIRERLFVGVLTSKNTLNTLAVAVNRTL 137

  Fly   113 AHLVNKIKFFIYADSVKTNYKLKNIVGFTDTRESRRPFHVVKYIADNYLDEYDYFLLVPDTVYVD 177
            .|.::|:.:|......|..:.: ::|...|.|.....:..:|::.|:|:.|||:|.||.|..|.:
 Frog   138 GHRLDKLVYFTGMRGRKLPHGM-SVVTHGDDRPIWNMYQTMKHLLDHYIQEYDWFYLVQDDTYTE 201

  Fly   178 ARKLVKLLYHMSITFDLYMGGARIGLDPSGGGASADGQSNEPPANEEEAPGASDRNYCSLEAGIL 242
            |.::.:|..|:||..|||:|                    .|   ||...|.::..||....|.|
 Frog   202 AHRIARLASHLSIDADLYLG--------------------RP---EEFIGGDTEGRYCYGGFGYL 243

  Fly   243 LSSSVIRKMRNNLERCVRIGSTSDHSVNIGRCVKYASRVAGCQESFQGMRQFSYALDAPGRRHRE 307
            ||.|::||::.:||.|.....::.....:|||:...:.| .|.:..:|:|...:.|.......:|
 Frog   244 LSRSLLRKLQPHLENCRNDILSARPDEWLGRCIIDYTHV-NCVQEHEGVRYRYFELGKNADPEKE 307

  Fly   308 FSELAKEEAFRNASTVYPVQTPEDFYRLHAYYSKHHLEKVQERGY-ALEQKSYRIANGSISNKIL 371
                 .:..|.||.|.:||..|...||||..::  |||  .||.| .:||....|.|.|    .|
 Frog   308 -----NDPRFTNAFTAHPVLDPVQMYRLHKRFA--HLE--LERTYQEMEQLQREIQNTS----SL 359

  Fly   372 EIR------WPLGVPPPSAPETRHDILTWQLLNGTHNF-LPNGNAEHAVATLSRIEAQDFAKVLE 429
            .:.      ||||:..|..|.||.::|.|........| ..:|:.:   ..|...:..|...|:.
 Frog   360 SVEGEHSATWPLGINSPFQPRTRFEVLRWDYFTEDQTFSCTDGSPK---CELIGADLADVTDVIS 421

  Fly   430 IAL-----QYAALKHPRLSYHSLHSAYRKFDATRGMDYQLHLNL----QEGSGRSRRLVIKSFEV 485
            .|:     :|..:.|.|  ...|.:.||:||.||||:|.|.|.|    |.|..||   :.|...:
 Frog   422 TAVDELNRKYQPVLHVR--KQQLLNGYRRFDPTRGMEYTLDLQLELVTQRGHSRS---ITKRVHL 481

  Fly   486 VKPLGRVEVVPSPYVTESTRIAMLVPAFEHQVPDALLFVEQYERICMQNQDNTFLLLIFMYRLES 550
            |:||..||::|.|||||::||.:::|........|..|::.:..|  |..:|:.|.|:|:|    
 Frog   482 VRPLSEVEIIPMPYVTEASRINIILPLTAQDREHAARFLQAFTDI--QGNENSLLTLLFIY---- 540

  Fly   551 PSKGDEDPFKA-----------LKTLALDLSSKYKTDGSRIAWVSIR--LPEQLSEPVDPQSWLL 602
                  |||:|           :|::..:...||:  ..:|.|:|::  .|.|:.          
 Frog   541 ------DPFQAQQVSQNDIFGQVKSIIAEYERKYR--DLKIPWISVKTDAPSQIR---------- 587

  Fly   603 HASMYGPRQLLSLVVADLALPKLGLESLVLLATPGMVFKADFLNRVRMNTIQGFQVYAPIGFQMY 667
                          :.|:...|..:::|..||..|.....:||||.|||||..:||:.||.||.|
 Frog   588 --------------LMDIISKKHPVDTLFFLAGVGSHLNTEFLNRCRMNTINNWQVFFPIHFQGY 638

  Fly   668 PCRWAHFCRE--CDTCDVSQSSGYFDRHNHDVIAFYSRDYVQARKLLHPQGLPIIRSDLDIDQLL 730
            ....:...::  ..|.::.:.:|.|||...:...||:.||:.||..:        .:|...::.:
 Frog   639 NPEVSEHGQQPHSATLELLRDAGRFDRDVFEESCFYNADYMSARSKM--------SADAQENEEI 695

  Fly   731 LQPGEETRPPGVESILDMFVAAQHSVHILRGVEPNLRFGQDVRNHLARGGTLPQSVPERCGREQC 795
            |:         :..|.:||: ....:|:.|.|||.|.  |..|:. |....|.:.:..||.:...
 Frog   696 LE---------ILDIYEMFI-RYSGLHVFRAVEPALL--QQYRSR-ACNPRLSEEIYHRCVQSNL 747

  Fly   796 IHLASRKQIGDAIIRYEDK 814
            ..|.||.|:  |::.:|.:
 Frog   748 EGLGSRSQL--AMLLFEQE 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChpfNP_572853.2 CHGN 254..804 CDD:461712 160/581 (28%)
chpfXP_031749638.1 Galactosyl_T <177..>283 CDD:473923 40/129 (31%)
CHGN 255..756 CDD:461712 160/581 (28%)

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