DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43313 and chpf2

DIOPT Version :9

Sequence 1:NP_001285184.1 Gene:CG43313 / 32259 FlyBaseID:FBgn0263005 Length:819 Species:Drosophila melanogaster
Sequence 2:XP_001337205.1 Gene:chpf2 / 100000654 ZFINID:ZDB-GENE-030131-7797 Length:764 Species:Danio rerio


Alignment Length:857 Identity:233/857 - (27%)
Similarity:375/857 - (43%) Gaps:173/857 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VIGLLLG-----LLLSWHIPEDIWEEECPEEAAENLLIE-------RFGQE------FEPHLNLI 61
            ::||.||     |::||  .:...:|.|.::.....|:.       ..|||      |:|.:...
Zfish    17 ILGLSLGCSLSLLMVSW--TQGDTDEACGDDLGNGRLVHNGHIRDLHNGQEGDGNEDFQPRIVPY 79

  Fly    62 NKPLAAKKPVKNVIRPRYYSSELGIREKLFIGVMTSQEHINTFATAFNRTTAHLVNKIKFFIYAD 126
            :|.  ..||.|.|:|.||..:||||||:|.:|:::|:..:||...|.|:|.||..::..||....
Zfish    80 HKD--PNKPHKKVLRTRYIHTELGIRERLLVGILSSRATLNTLGVAVNKTVAHHFHRTFFFTGLR 142

  Fly   127 SVKTNYKLKNIVGFTDTRESRRPFHVVKYIADNYLDEYDYFLLVPDTVYVDARKLVKLLYHMSIT 191
            |.|..:.:. ::...|.|.....:..::::..::.:|||:|.|..|..|..|.::::|:.|:|..
Zfish   143 SAKAPHGMA-VIAHGDDRPVWLMYETIRHLHQHHANEYDWFYLAQDDTYTQAERIMELVNHLSAG 206

  Fly   192 FDLYMGGARIGLDPSGGGASADGQSNEPPANEEEAPGASDR-NYCSLEAGILLSSSVIRKMRNNL 255
            .|:|||.|                        ||..|..:| .||....|.|||.|::.:::.:|
Zfish   207 QDMYMGRA------------------------EEFIGGEERARYCHGGYGYLLSRSLLARLQPHL 247

  Fly   256 ERCVRIGSTSDHSVN----IGRC-VKYASRVAGCQESFQGMRQFSYALDAPGRRHREFSELAKEE 315
            :.|    .....||.    :||| :.|..  ..|.|..|.|....:.|.......||.|     .
Zfish   248 DSC----RNDILSVRPDEWLGRCIIDYLG--LSCVEKHQEMTYRYFELQKNVDPEREDS-----A 301

  Fly   316 AFRNASTVYPVQTPEDFYRLHAYYSKHHLEKVQERGYALEQKSYRIANGSISNKILEIRWPLGVP 380
            .|:||.||:|:..|...||||..|::..|:....:...|:.:...|:..:...| ....||:|:.
Zfish   302 QFKNAFTVHPISEPALMYRLHKRYNQIELDWTYAQIQHLQNQINNISELTPEGK-AGATWPIGIN 365

  Fly   381 PPSAPETRHDILTWQLLNGTHNFLPNGNAEHAVATLSRIEAQDFAKVLEIAL-----QYAALKHP 440
            ||..|:||.:::.|:.....|.:....::..  ..|...:..|.:.|||.|:     :|    .|
Zfish   366 PPFRPKTRFEVINWEYFTEEHIYSCGDSSPK--CELRGADRADVSSVLETAVGRLNERY----QP 424

  Fly   441 RLSYHS--LHSAYRKFDATRGMDYQLHLNLQEGSGRSRRLVI-KSFEVVKPLGRVEVVPSPYVTE 502
            :|.:..  |.:.||:||.||||:|.|.|.|:..:.:....|| |...::|||..||::|.|||||
Zfish   425 QLRFRKRRLLNGYRRFDPTRGMEYVLDLALEAFTQKGHSQVIAKRVNLLKPLSAVEIIPMPYVTE 489

  Fly   503 STRIAMLVPAFEHQVPDALLFVEQYERICMQNQDNTFLLLIFMY-RLESPSKGDEDPFKALKTLA 566
            :||:.:::|...|.......|::.|....:...||..|..:|:| ..::......|.|..:|.:.
Zfish   490 ATRVQVILPVTAHDQDFVGNFLDMYVMNALDTHDNALLTFLFVYDPFDAQRVSQTDVFAGVKAMI 554

  Fly   567 LDLSSKYKTDGSRIAWVSIR--LPEQLSEPVDPQSWLLHASMYGPRQLLSLVVADLALPKLGLES 629
            .::..:|  ...:|.|:|::  :|.|:.                        :.|:...|..:::
Zfish   555 GEVEKRY--GDVKIPWISVKTEVPSQVK------------------------LMDIISKKHPVDT 593

  Fly   630 LVLLATPGMVFKADFLNRVRMNTIQGFQVYAPIGFQMY----------PCRWAHFCRECDTCDVS 684
            |..||:......||||||.|||.|..:||:.||.||.|          |...:.|..|      :
Zfish   594 LFFLASVWTEVNADFLNRCRMNAISNWQVFFPIHFQEYSPALVYRDQQPSAASSFASE------T 652

  Fly   685 QSSGYFDRHNHDVIAFYSRDYVQARKLLHPQGLPIIRSD-LDIDQLLLQPGEETRPPGVES--IL 746
            ...|:||||..:...||:.||:.||..:        .:| ||.|:||            ||  :.
Zfish   653 LRDGHFDRHVFEEACFYNADYMAARTKM--------AADILDNDELL------------ESMDVY 697

  Fly   747 DMFVAAQHSVHILRGVEP-----------NLRFGQDVRNHLARGGTLPQSVPERCGREQCIHLAS 800
            ::|| ....:|:.|.|||           |.||.:|:.:              ||.......|||
Zfish   698 EIFV-RYSGLHVFRAVEPALVQKYVHRECNPRFSEDIYH--------------RCVLSNLEGLAS 747

  Fly   801 RKQIGDAIIRYE 812
            |..:..|:...|
Zfish   748 RSHLAMALFEQE 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43313NP_001285184.1 CHGN 254..804 CDD:283361 159/589 (27%)
chpf2XP_001337205.1 Galactosyl_T 133..>272 CDD:304462 41/167 (25%)
CHGN 246..751 CDD:283361 159/589 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595286
Domainoid 1 1.000 193 1.000 Domainoid score I3140
eggNOG 1 0.900 - - E1_KOG3708
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 290 1.000 Inparanoid score I2782
OMA 1 1.010 - - QHG49343
OrthoDB 1 1.010 - - D331164at33208
OrthoFinder 1 1.000 - - FOG0003088
OrthoInspector 1 1.000 - - otm24677
orthoMCL 1 0.900 - - OOG6_106235
Panther 1 1.100 - - LDO PTHR12369
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5739
SonicParanoid 1 1.000 - - X2057
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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