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Protein Alignment CG2200 and vps35l
DIOPT Version :9
| Sequence 1: | NP_001285183.1 |
Gene: | CG2200 / 32258 |
FlyBaseID: | FBgn0030447 |
Length: | 240 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_012826281.1 |
Gene: | vps35l / 100145160 |
XenbaseID: | XB-GENE-5857341 |
Length: | 963 |
Species: | Xenopus tropicalis |
| Alignment Length: | 184 |
Identity: | 36/184 - (19%) |
| Similarity: | 56/184 - (30%) |
Gaps: | 80/184 - (43%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 92 GNTFVLLRSLYEMKLLDPIRELVLQRGLPYVG----------------SSAGTNVATRSIHTTND 140
||..:||.|:......| .:..|.:.::| .|.|.|:|
Frog 422 GNNALLLNSVMSAFRAD----FIATRSMDFIGMIKECDEAGFPKHLLFRSLGLNLA--------- 473
Fly 141 MPVAYPPSFEALALV--PFNI-----NPH-YLD-----PEAGSRH--------------KGETRD 178
:|.||..:.|.:: .:.: ||. |:: .|...|| |..|.|
Frog 474 --LADPPENDRLQILNEAWKVITKLRNPQDYINCSEVWVEYTCRHFTKREVNTILADIIKHMTPD 536
Fly 179 ERLEE----------------------FVAYHGLPVLGLREGTSVRVQGEKAIL 210
...|: |.....||.|.:.:..||||:..|.|:
Frog 537 RAFEDAYQQLQSVITKVITHFQDFSVLFSVEKFLPFLDMFQKESVRVEVCKCIM 590
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG2200 | NP_001285183.1 |
GAT_1 |
16..238 |
CDD:294025 |
36/184 (20%) |
| vps35l | XP_012826281.1 |
Vps35 |
<522..>737 |
CDD:367586 |
14/69 (20%) |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
1 |
1.000 |
225 |
1.000 |
Domainoid score |
I2480 |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG3340 |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
1 |
1.050 |
242 |
1.000 |
Inparanoid score |
I3241 |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0010913 |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
oto105399 |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
0 | 0.000 |
Not matched by this tool. |
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R17281 |
| SonicParanoid |
1 |
1.000 |
- |
- |
|
X8455 |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
1 |
0.960 |
- |
- |
|
|
|
8 | 7.940 |
|
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