DRSC/TRiP Functional Genomics Resources

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Protein Alignment lic and PBS2

DIOPT Version :9

Sequence 1:NP_477162.1 Gene:lic / 32257 FlyBaseID:FBgn0261524 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_012407.2 Gene:PBS2 / 853313 SGDID:S000003664 Length:668 Species:Saccharomyces cerevisiae


Alignment Length:293 Identity:123/293 - (41%)
Similarity:186/293 - (63%) Gaps:12/293 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 IDADSLEKICDLGRGAYGIVDKMRHKQTDTVLAVKRIPMTVNIREQHRLVMDLDISMRSSDCPYT 105
            |..|.||.:.:||.|.||.|.|:.||.|:.::|.|.:.:.::..:..:::|:|:: :...:.||.
Yeast   355 ITLDELEFLDELGHGNYGNVSKVLHKPTNVIMATKEVRLELDEAKFRQILMELEV-LHKCNSPYI 418

  Fly   106 VHFYGAMYREGDVWICMEVM-STSLDKFYPKVFLHDL-RMEESVLGKIAMSVVSALHYLHAQLKV 168
            |.||||.:.||.|::|||.| ..||||.|.:  ..:: .::|..|..||.:|:..|..|..|..:
Yeast   419 VDFYGAFFIEGAVYMCMEYMDGGSLDKIYDE--SSEIGGIDEPQLAFIANAVIHGLKELKEQHNI 481

  Fly   169 IHRDVKPSNILIN-RAGQVKICDFGISGYLVDSIAKTIDAGCKPYMAPERIDPQGNP--AQYDIR 230
            |||||||:|||.: ..|.||:||||:||.||.|:||| :.||:.|||||||... ||  |.|.::
Yeast   482 IHRDVKPTNILCSANQGTVKLCDFGVSGNLVASLAKT-NIGCQSYMAPERIKSL-NPDRATYTVQ 544

  Fly   231 SDVWSLGIGMIEMATGRYPY--DNWRTPFEQLRQVVEDSPPRLPEGTFSPEFEDFIAVCLQKEYM 293
            ||:||||:.::|||.|||||  :.:...|.||..:|:..|||||...||.:.:||:::||||...
Yeast   545 SDIWSLGLSILEMALGRYPYPPETYDNIFSQLSAIVDGPPPRLPSDKFSSDAQDFVSLCLQKIPE 609

  Fly   294 ARPNYEQLLKHSFIVEHLQRNTDISEFVARILD 326
            .||.|..|.:|.::|::..::..:||::...|:
Yeast   610 RRPTYAALTEHPWLVKYRNQDVHMSEYITERLE 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
licNP_477162.1 PKc_MKK3_6 44..326 CDD:173729 121/288 (42%)
PBS2NP_012407.2 PKc_PBS2_like 358..644 CDD:132953 122/290 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 255 1.000 Inparanoid score I647
Isobase 1 0.950 - 0 Normalized mean entropy S1024
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48013
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2221
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.040

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