DRSC/TRiP Functional Genomics Resources

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Protein Alignment lic and PBS2

DIOPT Version :10

Sequence 1:NP_477162.1 Gene:lic / 32257 FlyBaseID:FBgn0261524 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_012407.2 Gene:PBS2 / 853313 SGDID:S000003664 Length:668 Species:Saccharomyces cerevisiae


Alignment Length:293 Identity:123/293 - (41%)
Similarity:186/293 - (63%) Gaps:12/293 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 IDADSLEKICDLGRGAYGIVDKMRHKQTDTVLAVKRIPMTVNIREQHRLVMDLDISMRSSDCPYT 105
            |..|.||.:.:||.|.||.|.|:.||.|:.::|.|.:.:.::..:..:::|:|:: :...:.||.
Yeast   355 ITLDELEFLDELGHGNYGNVSKVLHKPTNVIMATKEVRLELDEAKFRQILMELEV-LHKCNSPYI 418

  Fly   106 VHFYGAMYREGDVWICMEVM-STSLDKFYPKVFLHDL-RMEESVLGKIAMSVVSALHYLHAQLKV 168
            |.||||.:.||.|::|||.| ..||||.|.:  ..:: .::|..|..||.:|:..|..|..|..:
Yeast   419 VDFYGAFFIEGAVYMCMEYMDGGSLDKIYDE--SSEIGGIDEPQLAFIANAVIHGLKELKEQHNI 481

  Fly   169 IHRDVKPSNILIN-RAGQVKICDFGISGYLVDSIAKTIDAGCKPYMAPERIDPQGNP--AQYDIR 230
            |||||||:|||.: ..|.||:||||:||.||.|:||| :.||:.|||||||... ||  |.|.::
Yeast   482 IHRDVKPTNILCSANQGTVKLCDFGVSGNLVASLAKT-NIGCQSYMAPERIKSL-NPDRATYTVQ 544

  Fly   231 SDVWSLGIGMIEMATGRYPY--DNWRTPFEQLRQVVEDSPPRLPEGTFSPEFEDFIAVCLQKEYM 293
            ||:||||:.::|||.|||||  :.:...|.||..:|:..|||||...||.:.:||:::||||...
Yeast   545 SDIWSLGLSILEMALGRYPYPPETYDNIFSQLSAIVDGPPPRLPSDKFSSDAQDFVSLCLQKIPE 609

  Fly   294 ARPNYEQLLKHSFIVEHLQRNTDISEFVARILD 326
            .||.|..|.:|.::|::..::..:||::...|:
Yeast   610 RRPTYAALTEHPWLVKYRNQDVHMSEYITERLE 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
licNP_477162.1 PKc_MKK3_6 44..326 CDD:173729 121/288 (42%)
PBS2NP_012407.2 PKc_PBS2_like 358..644 CDD:132953 122/290 (42%)

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