DRSC/TRiP Functional Genomics Resources

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Protein Alignment lic and Pak

DIOPT Version :10

Sequence 1:NP_477162.1 Gene:lic / 32257 FlyBaseID:FBgn0261524 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster


Alignment Length:319 Identity:94/319 - (29%)
Similarity:148/319 - (46%) Gaps:50/319 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PEAAIVPPRNLDSRAT-------------------IQIGD--RTFDIDADSLEKICDLGRGAYGI 59
            |:||:.|....::||.                   :.:||  |.:    ..:|||   |:||.|.
  Fly   522 PQAAVAPAATPNTRAANAKKKKMSDEEILEKLRTIVSVGDPNRKY----TKMEKI---GQGASGT 579

  Fly    60 VDKMRHKQTDTVLAVKRIPMTVNIREQHRLVMDLDISMRSSDCPYTVHFYGAMYREGDVWICMEV 124
            |.......|...:|:|:  |.::.:.:..|:::..:.||.:..|..|::..:.....::|:.|| 
  Fly   580 VYTAIESSTGMEVAIKQ--MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVME- 641

  Fly   125 MSTSLDKFYPKVFLHDL----RMEESVLGKIAMSVVSALHYLHAQLKVIHRDVKPSNILINRAGQ 185
                   :.|...|.|:    .|:|..:..:...|:.||.:|||. :|||||:|..|||:...|.
  Fly   642 -------YLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHAN-QVIHRDIKSDNILLGLDGS 698

  Fly   186 VKICDFGISGYLVDSIAK-TIDAGCKPYMAPERIDPQGNPAQYDIRSDVWSLGIGMIEMATGRYP 249
            ||:.|||....:....:| |...|...:||||.:..:    ||..:.|:|||||..|||..|..|
  Fly   699 VKLTDFGFCAQISPEQSKRTTMVGTPYWMAPEVVTRK----QYGPKVDLWSLGIMAIEMVEGEPP 759

  Fly   250 YDNWRTPFEQLRQVVEDSPPRLPE-GTFSPEFEDFIAVCLQKEYMARPNYEQLLKHSFI 307
            |.| ..|.:.|..:..:..|.:.| ...|..|:||:..||:.|...|.:...||||.|:
  Fly   760 YLN-ENPLKALYLIATNGKPEIKEKDKLSSAFQDFLDQCLEVEVDRRASALDLLKHPFL 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
licNP_477162.1 PKc_MKK3_6 44..326 CDD:173729 85/270 (31%)
PakNP_001138013.2 PBD 83..139 CDD:395634
STKc_PAK_I 558..818 CDD:270814 88/283 (31%)
Blue background indicates that the domain is not in the aligned region.

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