DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lic and Map2k4

DIOPT Version :10

Sequence 1:NP_477162.1 Gene:lic / 32257 FlyBaseID:FBgn0261524 Length:334 Species:Drosophila melanogaster
Sequence 2:XP_063124696.1 Gene:Map2k4 / 287398 RGDID:1307040 Length:446 Species:Rattus norvegicus


Alignment Length:315 Identity:169/315 - (53%)
Similarity:234/315 - (74%) Gaps:7/315 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NLDSRATIQIG-DRTFDIDADSLEKICDLGRGAYGIVDKMRHKQTDTVLAVKRIPMTVNIREQHR 88
            :::|...::|. ::.:|..|:.|:.:.::||||||.|:||.||.:..::|||||..||:.:||.:
  Rat   127 SIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQ 191

  Fly    89 LVMDLDISMRSSDCPYTVHFYGAMYREGDVWICMEVMSTSLDKFYPKVF--LHDLRMEESVLGKI 151
            |:||||:.||||||||.|.||||::||||.|||||:||||.||||..|:  |.|: :.|.:||||
  Rat   192 LLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV-IPEEILGKI 255

  Fly   152 AMSVVSALHYLHAQLKVIHRDVKPSNILINRAGQVKICDFGISGYLVDSIAKTIDAGCKPYMAPE 216
            .::.|.||::|...||:||||:||||||::|:|.:|:|||||||.||||||||.||||:||||||
  Rat   256 TLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE 320

  Fly   217 RIDPQGNPAQYDIRSDVWSLGIGMIEMATGRYPYDNWRTPFEQLRQVVEDSPPRL---PEGTFSP 278
            ||||..:...||:|||||||||.:.|:||||:||..|.:.|:||.|||:..||:|   .|..|||
  Rat   321 RIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSP 385

  Fly   279 EFEDFIAVCLQKEYMARPNYEQLLKHSFIVEHLQRNTDISEFVARILDLPDAQPA 333
            .|.:|:.:||.|:...||.|::||||.||:.:.:|..:::.:|.:|||...|.|:
  Rat   386 SFINFVNLCLTKDESKRPKYKELLKHPFILMYEERTVEVACYVCKILDQMPATPS 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
licNP_477162.1 PKc_MKK3_6 44..326 CDD:173729 161/286 (56%)
Map2k4XP_063124696.1 None

Return to query results.
Submit another query.