DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lic and wis1

DIOPT Version :9

Sequence 1:NP_477162.1 Gene:lic / 32257 FlyBaseID:FBgn0261524 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_595457.1 Gene:wis1 / 2541055 PomBaseID:SPBC409.07c Length:605 Species:Schizosaccharomyces pombe


Alignment Length:325 Identity:124/325 - (38%)
Similarity:191/325 - (58%) Gaps:20/325 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TPFTIAKEPEAAIVPPRNLDSRATIQ------IGDRTFDIDADSLEKICDLGRGAYGIVDKMRHK 66
            |||:...:...|.....|..::|.:.      ....:|.|:...:.|:.:||:|.||:|.|..|:
pombe   276 TPFSTFSDILDAKSGTLNFKNKAVLNSEGVNFSSGSSFRINMSEIIKLEELGKGNYGVVYKALHQ 340

  Fly    67 QTDTVLAVKRIPMTVNIREQHRLVMDLDISMRSSDCPYTVHFYGAMYREGDVWICMEVMST-SLD 130
            .|...:|:|.|.:::.....::::|:||| :..:..||.|.||||.:.||.|:||||.|.. |:|
pombe   341 PTGVTMALKEIRLSLEEATFNQIIMELDI-LHKAVSPYIVDFYGAFFVEGSVFICMEYMDAGSMD 404

  Fly   131 KFYPKVFLHDLRMEESVLGKIAMSVVSALHYLHAQLKVIHRDVKPSNILINRAGQVKICDFGISG 195
            |.|....     .:|.||.:.|.:||..|..|..:..:|||||||:|:|:|..||||:||||:||
pombe   405 KLYAGGI-----KDEGVLARTAYAVVQGLKTLKEEHNIIHRDVKPTNVLVNSNGQVKLCDFGVSG 464

  Fly   196 YLVDSIAKTIDAGCKPYMAPERI---DPQGNPAQYDIRSDVWSLGIGMIEMATGRYPY--DNWRT 255
            .||.||:|| :.||:.|||||||   .|......|.:::||||||:.::|||.|.|||  :::.:
pombe   465 NLVASISKT-NIGCQSYMAPERIRVGGPTNGVLTYTVQADVWSLGLTILEMALGAYPYPPESYTS 528

  Fly   256 PFEQLRQVVEDSPPRLPEGTFSPEFEDFIAVCLQKEYMARPNYEQLLKHSFIVEHLQRNTDISEF 320
            .|.||..:.:..||.||: :||||..||:..||.|....||:|.:|..|.:::::...:.|::.:
pombe   529 IFAQLSAICDGDPPSLPD-SFSPEARDFVNKCLNKNPSLRPDYHELANHPWLLKYQNADVDMASW 592

  Fly   321  320
            pombe   593  592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
licNP_477162.1 PKc_MKK3_6 44..326 CDD:173729 116/283 (41%)
wis1NP_595457.1 PKc_PBS2_like 318..600 CDD:132953 116/283 (41%)
S_TKc 322..579 CDD:214567 115/264 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 216 1.000 Inparanoid score I927
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101822
Panther 1 1.100 - - O PTHR48013
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2221
SonicParanoid 1 1.000 - - X2955
TreeFam 00.000 Not matched by this tool.
76.990

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