DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lic and pek1

DIOPT Version :9

Sequence 1:NP_477162.1 Gene:lic / 32257 FlyBaseID:FBgn0261524 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_596795.1 Gene:pek1 / 2540919 PomBaseID:SPBC543.07 Length:363 Species:Schizosaccharomyces pombe


Alignment Length:367 Identity:128/367 - (34%)
Similarity:184/367 - (50%) Gaps:50/367 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKRHRLTPFTIAKEPEAAIVPPRNLDSRATIQIGDRTF------------------------DI 41
            |||:..|...|.....|..|..|...|::..::|.|..|                        ::
pombe     1 MSKKPVLNLDTSNGFSEEYISHPERNDNQGIVEITDLVFSSESKLTQRKESRDSKTFVPSFLEEL 65

  Fly    42 DADSLEKIC---------DLGRGAYGIVDKMRHKQTDTVLAVKRIPMTVNIREQHRLVMDLDISM 97
            |.|.|.::.         .||.|..|.|.|.|.:.|..:.|:|.:....|...|.:|:.:|.|: 
pombe    66 DDDHLHELVTNGGILYMNSLGEGVSGSVRKCRIRGTQMIFAMKTVLAAPNTALQKQLLRELKIN- 129

  Fly    98 RSSDCPYTVHFYGAMYR--EGDVWICMEVMST-SLDKFYPKVFLHDLRMEESVLGKIAMSVVSAL 159
            ||...||.|.:|||.|.  |..:.|.||.... |||..|.:|.....|..|..|||||..|:|.|
pombe   130 RSCTSPYIVKYYGACYNNAECQLNIAMEYCGAGSLDAIYKRVRSQGGRTGERPLGKIAFGVLSGL 194

  Fly   160 HYLHAQLKVIHRDVKPSNILINRAGQVKICDFGISGYLVDSIAKTIDAGCKPYMAPERIDPQGNP 224
            .|||.: |:||||:||||||:...||||:||||:||.||:|:|.|. .|...|||||||    :.
pombe   195 SYLHDR-KIIHRDIKPSNILLTSKGQVKLCDFGVSGELVNSLAGTF-TGTSYYMAPERI----SG 253

  Fly   225 AQYDIRSDVWSLGIGMIEMATGRYPYDNWRT----PFEQLRQVVEDSPPRLPEG---TFSPEFED 282
            ..|.|.||:||||:.::|:|..|:|:....:    |.|.|..::...||.||:.   .:|..|:.
pombe   254 GSYTISSDIWSLGLTLMEVALNRFPFPPEGSPPPMPIELLSYIINMPPPLLPQEPGIKWSKSFQH 318

  Fly   283 FIAVCLQKEYMARPNYEQLLKHSFIVEHLQRNTDISEFVARI 324
            |:.|||.|:...||..:::|.|.::....:.:.|:.||:.::
pombe   319 FLCVCLDKDKTRRPGPQKMLTHPWVKAFERIHVDMEEFLRQV 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
licNP_477162.1 PKc_MKK3_6 44..326 CDD:173729 115/300 (38%)
pek1NP_596795.1 PKc_Pek1_like 77..361 CDD:270793 113/291 (39%)
Pkinase 85..343 CDD:278497 110/264 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48013
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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