DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hep and sek-1

DIOPT Version :9

Sequence 1:NP_001368982.1 Gene:hep / 32256 FlyBaseID:FBgn0010303 Length:1294 Species:Drosophila melanogaster
Sequence 2:NP_509322.2 Gene:sek-1 / 181043 WormBaseID:WBGene00004758 Length:336 Species:Caenorhabditis elegans


Alignment Length:315 Identity:131/315 - (41%)
Similarity:186/315 - (59%) Gaps:13/315 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 GLNRTRP-VILPLPTPPHPPVSETDMKLKIIMEQTGKLNINGRQYPTDINDLKHLGDLGNGTSGN 210
            |..|..| :.:.:|||...|....:.:..|      ||.....:......||..|.:||.|..|.
 Worm     5 GRERKLPGMKIVMPTPVETPTMNLEDRCLI------KLTNESEEIEIAATDLVVLEELGKGGYGI 63

  Fly   211 VVKMMHLSSNTIIAVKQMRRTGNAEENKRILMDLDVVLKSHDCKYIVKCLGCFVRDPDVWICMEL 275
            |.||.|..|..|:|||:::.:.|.:..|::|.:||...:|..|..:|:..|...|:.|||||||:
 Worm    64 VEKMQHRQSGIIMAVKRIKSSINDQSQKQMLNELDACRRSDCCPQMVRFYGAMFREGDVWICMEV 128

  Fly   276 MSMCFDKLLKLS---KKPVPEQILGKVTVATVNALSYLKDKHGVIHRDVKPSNILIDERGNIKLC 337
            |....||..:.:   .|.:||..:||:.::.:..|:::|::..:|||||||||||::..|.:|:|
 Worm   129 MDTSLDKFYRHAYKIGKHIPEPFIGKMALSVIEGLNFMKEQLNLIHRDVKPSNILLNRHGQVKIC 193

  Fly   338 DFGISGRLVDSKANTRSAGCAAYMAPERIDPK-KPKYDIRADVWSLGITLVELATARSPYEGCNT 401
            ||||||.|.:|.|.|..|||..||.|||||.: |..||:||||||||||::|:|....||....|
 Worm   194 DFGISGHLTNSMAKTVQAGCKPYMPPERIDGETKSAYDVRADVWSLGITIIEIAVGTHPYANWKT 258

  Fly   402 DFEVLTKVLDSEPPCLPYGEGYNFSQQFRDFVIKCLTKNHQDRPKYPELLAQPFI 456
            .||.|.:|:...||.||...|::...|:  ||.:||.|::.:|||||||||.||:
 Worm   259 PFEQLKQVVKEPPPKLPMESGFSVDCQY--FVKRCLEKDYNERPKYPELLAMPFM 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hepNP_001368982.1 PKc_MKK7 181..476 CDD:270791 123/280 (44%)
sek-1NP_509322.2 PKc_MKK3_6 48..328 CDD:173729 121/266 (45%)
S_TKc 52..311 CDD:214567 118/260 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D470057at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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