DRSC/TRiP Functional Genomics Resources

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Protein Alignment rsh and Sipa1l1

DIOPT Version :10

Sequence 1:NP_001285176.1 Gene:rsh / 32253 FlyBaseID:FBgn0265597 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_647546.2 Gene:Sipa1l1 / 246212 RGDID:708497 Length:1783 Species:Rattus norvegicus


Alignment Length:929 Identity:246/929 - (26%)
Similarity:390/929 - (41%) Gaps:204/929 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 QEQRPSTSSAGS-CSDHSMPLISTHSSTHHLAHQQVDSACQALPPPTIITSSVTPP--------A 341
            |.:||.|:...| .|....|.:.|..........|..|...:      :.::|.||        .
  Rat     8 QTERPVTADRASVVSTDGTPKVHTDDFYMRRFRSQNGSLGSS------VMAAVGPPRSEGPHHIT 66

  Fly   342 TSPTAPKGRRDSQTQCGRVNRRDSKAGVSPERA---PRLQRLQRQATAFDE----GCLPGGSRRG 399
            ::|..|                  |.||....|   ||.:.::..:.:..|    .||...|.:|
  Rat    67 STPGVP------------------KMGVRARIADWPPRKENVKESSRSSQEIETSSCLESLSSKG 113

  Fly   400 S-------------QPALSPDPPDDCERRTSRRDSLSPDSASRGGRRDSRTHLSPDRSHERDGSP 451
            |             ..|:.....:..:.:|...:|:           ||| .|.|:   ....||
  Rat   114 SPVSQGSSVSLNSNDSAMLKSIQNTLKNKTGPAESM-----------DSR-FLMPE---AYPSSP 163

  Fly   452 R---RHTLRRQSSSAARSPRSPDSNSCCSSRDPSPCSRPQTQTTVEQNQRPAIRRQSTTEEIL-- 511
            |   |...:|.:|....|....||...|.|  |:..|.|....  |.....:|.:|.|:.|..  
  Rat   164 RKALRRIRQRSNSDITISELDVDSFDECIS--PTYKSGPSLHR--EYGSTSSIDKQGTSGESFFG 224

  Fly   512 IARGFR-----RQSTTEEMIRCRNFRRQSSQSDDVCRYRGRRDS-SAQIIDGTIGTMTVETTSTF 570
            :.:|::     |..|..::            ||.:....|:... |..:|||.|...  |....|
  Rat   225 LLKGYKDDRADRGPTPTKL------------SDFLITGGGKGSGFSLDVIDGPISQR--ENLRLF 275

  Fly   571 FD--------SSTQTEPSPLYDNNHYHEECLRCNSCGLNLTGPNQKRARRFKNQI------LCDL 621
            .:        |.::|..|.::..       || |:.|..|...:.....|.::.:      .|..
  Rat   276 KEREKPLKRRSKSETGDSSIFRK-------LR-NAKGEELGKSSDLEDNRSEDSVRPWTCPKCFA 332

  Fly   622 HFADV--ALMECSDFMQQLRSFKPQSLGCAVARRKSSTT----------LIFPL-------PPQA 667
            |: ||  .|.:.::.:....:         |.:|:::||          :..||       .|..
  Rat   333 HY-DVQSILFDLNEAIMNRHN---------VIKRRNTTTGASAAAVASLVSGPLSHSASFSSPMG 387

  Fly   668 CSDEFCEEYPHNLMPTPGYWIECSRQKITMPTPH---TIWDESDSEHEDIRAGSASDAYLERECS 729
            .:::...:  .:|....|   :....::.|..|:   .|..|.:.:....::.|.|.:..|   |
  Rat   388 STEDLNSK--GSLGMDQG---DDKSNELVMSCPYFRNEIGGEGERKISLSKSNSGSFSGCE---S 444

  Fly   730 DLYEDDEDSEATPS-------PRKKTTIEEQWDQQGAFELISVEQETYEKYFYGTEHWNYFTSDE 787
            ..:|....|..|.:       |::...:.....::...|.:.:....|.|.||..||||||.:||
  Rat   445 TSFESALSSHCTNAGVAVLEVPKESLMLHLDRVRRYTVEHVDLGAYYYRKCFYQKEHWNYFGADE 509

  Fly   788 DLGPVILSIKQE-----TLNGRD-QFRILVRAGS-YTVHG-----LIPASCVF--ADRYNREEVV 838
            :||||.:||::|     ..||.. .:||:.|... .|:.|     .||::...  |.....:||:
  Rat   510 NLGPVAVSIRREKPEDMKENGSPYNYRIIFRTSELMTLRGSVLEDAIPSTAKHSTARGLPLKEVL 574

  Fly   839 RSLGKEVNLNPPLTLGQLPDTPEELLKLDQVFIKSELKVGVIFVKEDQYTEEQILDNNENSPLFD 903
            ..:..|:|:.........|...|:|:|||:..:..:.|||:::.|..|.|||::.:|....|.|:
  Rat   575 EHVIPELNVQCLRLAFNTPKVTEQLMKLDEQGLNYQQKVGIMYCKAGQSTEEEMYNNESAGPAFE 639

  Fly   904 EFLTLLGDRVRLRGFDKYKGGLDTVHDLTGLFSVYTNWRNIEIMFHVSTLLPYEKHDPQKLQRKR 968
            |||.|||:||||:||:||:..|||..|.||..|:||.:::.||||||||:|||..::.|:|.|||
  Rat   640 EFLQLLGERVRLKGFEKYRAQLDTKTDSTGTHSLYTTYKDYEIMFHVSTMLPYTPNNKQQLLRKR 704

  Fly   969 HIGNDIVCVVFLEADNTRFSPACIKSHFLHTFILVRVSARIKHKPTR----YEVSVVTRDEVGAY 1029
            |||||||.:||.|.....|||..|:|||.|.|::||.     |.|..    |.|:|....:|.::
  Rat   705 HIGNDIVTIVFQEPGAQPFSPKNIRSHFQHVFVIVRA-----HNPCTESVCYSVAVTRSRDVPSF 764

  Fly  1030 KPYLWEQSVFEKGPMFREWLLTKIVNGERASYSAPKFARMQERTRSQMLEDLV-MNLSNHA--ET 1091
            .|.:.:...|.|..:||::||.|::|.|.|::.:.||..|..|||.:.|:||. .|::|..  .:
  Rat   765 GPPIPKGVTFPKSNVFRDFLLAKVINAENAAHKSEKFRAMATRTRQEYLKDLAEKNVTNTPIDPS 829

  Fly  1092 GQIP------------KPY 1098
            |:.|            |||
  Rat   830 GKFPFISLASKKKEKSKPY 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rshNP_001285176.1 PHA03309 <207..539 CDD:165564 57/291 (20%)
LIM <583..623 CDD:259829 7/45 (16%)
Rap_GAP 893..1074 CDD:460463 84/184 (46%)
BTB_POZ 1289..>1344 CDD:453885
BTB <1467..1526 CDD:197585
BACK 1531..1603 CDD:475122
Sipa1l1NP_647546.2 Rap_GAP 629..809 CDD:460463 84/184 (46%)
PDZ_SIPA1-like 953..1025 CDD:467227
SPAR_C 1483..1728 CDD:463383
ZapB 1716..1771 CDD:428718
Blue background indicates that the domain is not in the aligned region.

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