DRSC/TRiP Functional Genomics Resources

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Protein Alignment rsh and F53A10.2

DIOPT Version :10

Sequence 1:NP_001285176.1 Gene:rsh / 32253 FlyBaseID:FBgn0265597 Length:1799 Species:Drosophila melanogaster
Sequence 2:NP_001022190.1 Gene:F53A10.2 / 173502 WormBaseID:WBGene00018734 Length:811 Species:Caenorhabditis elegans


Alignment Length:887 Identity:230/887 - (25%)
Similarity:380/887 - (42%) Gaps:200/887 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 SPRRHTLRRQSSSAARSPRSPDSNSCCSSRDPSPCS-----RPQTQTTVEQNQRPAIRRQSTTEE 509
            :|.||.   .|....||..|..|:|..:|.: ..||     :.:..:.:|.|:....:..: .::
 Worm    29 APLRHA---TSQYNLRSTGSTSSDSSTASEN-DKCSDFSSLKSRRASCIELNKEDEFKVMA-ADK 88

  Fly   510 ILIARGFRRQSTTEEMIRCRNFRRQSSQSDDVCRYRGRRDSSA--QIIDGTIG------------ 560
            :|:|....:.:|:.:.||   :|..|::|........||.|..  ::|.|.:.            
 Worm    89 LLMAMENMKHATSSQAIR---WRTTSTESLPGIIKSNRRHSKGPLELIQGLMAKKAAVGRPAKFK 150

  Fly   561 --------TMTVETTSTFFDSSTQTEPSPLYDNNHYHEECLRCNSCGLNLTGPNQKRARRFKNQI 617
                    |:...|.|....|.....|:..:.|...|::        .|.:..:.:..|...|::
 Worm   151 NLGVVGPPTLISSTVSLHEISGFTHNPTSGHQNEQTHQK--------TNGSAVHNQLTRNIMNEV 207

  Fly   618 LCDLHFADVALMECSDFMQQLRSFKPQSLGCAVARRKSSTTLIFPLPPQACSDEFCEEYPHNLMP 682
            |                                       |.:.|             ||..::|
 Worm   208 L---------------------------------------TKVGP-------------YPQIVLP 220

  Fly   683 TPGYWIECSRQKITMPTPHTIWDESDSEHEDIRAGSASDAYLERECSDLYEDDEDSEATPSPRKK 747
            :.|:|::...|:..|          |.:..::...|.:...|        |.||.|..       
 Worm   221 SNGFWMDGVNQQHHM----------DDQVNNMNVNSCARFKL--------ETDETSHC------- 260

  Fly   748 TTIEEQWDQQGAFELISVEQETYEKYFYGTEHWNYFTSDEDLGPVILSIKQETLNGRDQFRILVR 812
                                  |.::|:|.||.::|.:|..:||::||::.|.::..|.|||::|
 Worm   261 ----------------------YRRHFFGREHHDFFANDPIVGPLVLSVRTEVISSCDHFRIILR 303

  Fly   813 AGSYTVHGLIPASCVFADRYNREEVVRSLGKEVNLN--PPLTLGQLPDTPEELLKLDQVFIKSEL 875
            ....|:|.::.|:.: |||.:...:.:.|.:|:...  .|:.   .|...|.:::.|:..:.:..
 Worm   304 TRKGTIHEIVSATAL-ADRPSASRMAKLLCEEITTEQFSPVA---FPGGSELIVQYDEHVLTNTY 364

  Fly   876 KVGVIFVKEDQYTEEQILDNNENSPLFDEFLTLLGDRVRLRGFDKYKGGLDTVHDLTGLFSVYTN 940
            |.|||:.|..|.||||:..|...||.|||||:::||.|:|.||.||:|||||.|:.||..||::.
 Worm   365 KFGVIYQKGGQTTEEQLFGNPHGSPAFDEFLSMIGDSVQLNGFQKYRGGLDTAHNQTGHQSVFSE 429

  Fly   941 WRNIEIMFHVSTLLPYEKHDPQKLQRKRHIGNDIVCVVFLEADNTRFSPACIKSHFLHTFILVRV 1005
            ::|.||||||||:|||...|.|:||||||||||||.::|.|| ||.|:|..|.|:|||.:::|:.
 Worm   430 FKNREIMFHVSTMLPYTIGDAQQLQRKRHIGNDIVAIIFQEA-NTPFAPDMIASNFLHAYVVVQP 493

  Fly  1006 SARIKHKPTRYEVSVVTRDEVGAYKPYLWEQSVFEKGPMFREWLLTKIVNGERASYSAPKFARMQ 1070
            ...:..: .||.|||..||:|..:.|.|...|:|::|..||.:||||::|.|.|:|.:.|||::.
 Worm   494 IDALTDR-VRYRVSVAARDDVPFFGPTLPTPSIFKRGQDFRNFLLTKLINAENAAYKSSKFAKLA 557

  Fly  1071 ERTRSQMLEDLVMNLSNHAETGQIPKPYRRGSWRPIGEDEYIKMLHARVLDNNTHHEQQQQLLLQ 1135
            |||||.:|:.|...|...||....|......|.   ||........:...........::..:.:
 Worm   558 ERTRSSLLDGLHATLRERAEFYATPLLESTSSG---GESAATTSSSSNSYGGGILSSVKKAFIGR 619

  Fly  1136 QQHMQHTQHMQHLPSHNICCYCNNNATELHTAGAIH-----NNNDNNNTTTTTTFTH---RHNNN 1192
            .:.:  :|...|:|               |.|..|:     ..:.::.:::|:..||   |....
 Worm   620 SRSV--SQEASHVP---------------HRAATINVTSRPKKSISSTSSSTSARTHSPIRDEEV 667

  Fly  1193 NNNYSEQ---QQQQLPQQQQHDSQQQQQLLQPQQHQLLHQLQLSTSSLTHTSCCAMLHLCARHSH 1254
            ...|.::   ..|:.| ..:|||....:.:...      ::...|.:.:.|.|....|:.|.|..
 Worm   668 VKPYRKEWEISSQESP-DNEHDSDTGMESMSST------EMSGQTRASSCTFCVDDFHVAANHQS 725

  Fly  1255 ---MRPSSPLLDSVRDQFEDYDQLAKDFTRVFLNEEPSCLTN 1293
               .|..:..:|..|.|.|.:|         .|.:..||.|:
 Worm   726 SDAKRLETLCVDVTRLQNEKHD---------LLRQNVSCKTD 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rshNP_001285176.1 PHA03309 <207..539 CDD:165564 21/93 (23%)
LIM <583..623 CDD:259829 6/39 (15%)
Rap_GAP 893..1074 CDD:460463 93/180 (52%)
BTB_POZ 1289..>1344 CDD:453885 3/5 (60%)
BTB <1467..1526 CDD:197585
BACK 1531..1603 CDD:475122
F53A10.2NP_001022190.1 Rap_GAP 382..561 CDD:460463 93/180 (52%)
Blue background indicates that the domain is not in the aligned region.

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