DRSC/TRiP Functional Genomics Resources

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Protein Alignment rsh and LOC1273968

DIOPT Version :10

Sequence 1:NP_001285176.1 Gene:rsh / 32253 FlyBaseID:FBgn0265597 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_061497090.1 Gene:LOC1273968 / 1273968 VectorBaseID:AGAMI1_006025 Length:2252 Species:Anopheles gambiae


Alignment Length:1463 Identity:276/1463 - (18%)
Similarity:425/1463 - (29%) Gaps:545/1463 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SHQVGLVWQGGNGWDDLVREQLEESTIRQRLGGRRDSAAQITTPPSTS--------------PPP 89
            :|..|.....|:|.:   |..|:|.  |...||...|....||..:||              ..|
Mosquito   732 AHMGGSANGAGSGQN---RTGLDED--RMINGGGAGSMTNATTSTATSVAGVMRLQSTRSIPGTP 791

  Fly    90 GLQR-----------------RRRSSLAQLTDILREWSGGTKQQQQHHSQQQQQQLQQASRSKAQ 137
            .|.|                 |||..:|.|...:     |...::.|.:.:|...:...|.|:..
Mosquito   792 SLNRSYSEGSLMSAPFRKSRARRRLRIAGLGLTM-----GGNSREHHTAAEQHHHMADHSFSRLL 851

  Fly   138 LNRRETLADLARSLPWRT-STTTDASTGAG-----------------------GSGGGGCTTYMA 178
            .|....|:..:.:|...: |..|:...|..                       |||.|       
Mosquito   852 SNTSTFLSISSENLEMASFSECTEVPLGGDSQVGSVVGGVVRRAVSLDSVRPPGSGSG------- 909

  Fly   179 PRKRRESSADSGIRSMR---------SRRDSNTAEFVRHWNRRESGAVEEQPSVSVPVVVECSKS 234
              |:|....|...|..|         ||..|.||.     :..|||::::.|.....|:...|.|
Mosquito   910 --KKRHPDEDGYHRHSRVGASCEAGGSRSPSPTAS-----SGIESGSIKDSPMQIADVLTADSSS 967

  Fly   235 ASRR-------GSGESYLSSSRRDSNVAG--------------------------RVTTPPPPGK 266
            ...:       ||..|..::|.|.|.:||                          ::..|....:
Mosquito   968 IDTQDDPQSFGGSSSSMATTSDRRSILAGGTAKGWLPDVAAVMWRRMLGALGDVNKILNPKLHAQ 1032

  Fly   267 -YQ----MTK---------------KRDSLAAPEFPNFRQEQRP--------------------- 290
             ||    ||:               ...|..:..|||......|                     
Mosquito  1033 VYQYLVSMTESLIKIRMNQGISLDGSGHSSTSSAFPNGTNLVPPVALVAPWCYGALALDAQYAQG 1097

  Fly   291 ----------STSSAGSCSDHSMPLISTHSSTHHLAHQQVDSACQA------------------L 327
                      ...|..|..::.:||.      :|..||.:....:|                  |
Mosquito  1098 KLYAMQLLCTIVQSGASLGNNQLPLF------YHALHQALTGEDRAMAYTALRYLGGPRFLSLLL 1156

  Fly   328 PPPTIITSSVTPPAT-----SPTAPKGRRDSQTQCGRVNRRDSKAGVSPERAPRLQ--RLQRQAT 385
            |..|::...:...||     |.|.|                         .|||.|  .|.....
Mosquito  1157 PGHTLLLLDLVHAATVVLTSSETGP-------------------------NAPRAQVAGLLGSLL 1196

  Fly   386 AFDEGCLPGGSRRGSQPALS----PDPPDD-------CERR--TSR--------------RDSLS 423
            .|....|||...:.|:|.:.    ||..:.       |.||  |::              ::..:
Mosquito  1197 CFPRTSLPGPVLQPSEPHIDLMECPDLQEHVLNVVLRCARREPTAKARCIAIASLGQWILQNLTN 1261

  Fly   424 PDSASRGG--------------------RRDSRTHLSPDRSHE------RDGSPRRHTLRR---- 458
            |.....||                    ||||.||....|..|      :....:.||:.|    
Mosquito  1262 PTGQHNGGDGEPAFKQKVPQHSSEASSARRDSVTHTVNPRIREAFQVILQALQFKHHTIARLASE 1326

  Fly   459 -------QSSSAARSPRSPD--SNSCCSSRD----PSPCSRPQTQTT--------------VEQN 496
                   |.:...:..|.|.  .::.|.|.|    |.|....:|..|              |...
Mosquito  1327 TLKLCAEQGARIEQIERLPQLIIDTVCLSLDIHNVPHPKESDKTVLTSLLLTLGELCMSFSVRTL 1391

  Fly   497 QRPAIRRQSTTEEIL---------IARGFR-----------------------RQS--------- 520
            |:|  :...:||.::         ||.|.:                       |:|         
Mosquito  1392 QQP--KHHDSTEPLILIVFRILYKIATGLQNGERIKLFTTDEDFDSTIVVDDVRESGSGGIGEAG 1454

  Fly   521 ---TTEEMIRCRN-------------------------FRRQSS---QSDDVCRYRGRRDSSAQI 554
               |.|.:..|::                         ..|.||   :.||:....|   ::|.:
Mosquito  1455 GYQTAETIASCQSAIRLCAKTVAMHLITNLGHFPMGIGATRLSSLVDEQDDLMSATG---AAAPV 1516

  Fly   555 IDGTIGT----------------------------------MTVETTSTFFDSSTQTEPSP---- 581
            ..|..|.                                  ::.|..::|.:......|..    
Mosquito  1517 HPGVSGAAPSVAMLQRENSIAGARVDAMEHVLASPNLQLLMLSPELVASFIELPALKLPGGGATA 1581

  Fly   582 ------------LYDNNH---------YHEECLRCNSCGLNLTGPNQKRARRFKNQILCDLHFAD 625
                        |.|.|.         |.|..|   |.|.|.|..|    ..|::......|:|.
Mosquito  1582 GLLTANRQVRLLLRDLNGKACWDASILYQEPAL---SAGSNDTDRN----ATFQSAAPVSRHYAF 1639

  Fly   626 VALMECSDFMQQLRSFKPQSLGCAVARR-KSSTTLIFPLPPQACSDEFCEEYPHNLMPTPGYWIE 689
            ..:...|.   ||     ...|...||. .|.:..|.||...|..........|.|...|.:.:.
Mosquito  1640 ATVPTGSG---QL-----AGAGSVTARHFASGSASIDPLMSTAIGLPMSHGPRHTLRHRPVHQLP 1696

  Fly   690 CSRQKITMPTPHTIWDESDSEHEDIRAGSASDAYLERECSDLYEDDEDSEATPSPRKKTTIEEQW 754
            .::..    .|..  |:.|...:.|       .|...||.|..|...:: |.|||.....     
Mosquito  1697 VAKDL----APDL--DQLDDLLQYI-------GYTSPECLDSSEVPLNT-AGPSPLGAAL----- 1742

  Fly   755 DQQGAFELISVEQETYEKYFYGTEHWNYFTSDEDLGPVILSIKQETLNGRDQFRILVRAGSYTVH 819
              :|....|.:.|.|.|......:  |..|:.:.      .:.:...:|...:..||.:..|..:
Mosquito  1743 --EGQTISIILNQRTIEAEAVARQ--NAGTTGQP------GVDRSLPSGTSSYPTLVSSSGYGSY 1797

  Fly   820 ------------GLIPASCVFADRYNREEVVRSLGKEVNLNPPLTLGQ----------------- 855
                        |.|..:   |:....::..:.|.:......|..||:                 
Mosquito  1798 SPGQSYSDDSGTGTIARA---ANTMQTQQQQQQLDRSDATTKPFQLGRILFNQLGLAGWERRKRT 1859

  Fly   856 --LPDTPE---ELLKLDQVFIKSELKVGVIFVKEDQYTEEQILDNNENSPLFDEFLTLLGDRVRL 915
              |..|.:   ||..||....:...|:.||:|...|..:..||.|...|..::.|::.||..|.|
Mosquito  1860 HLLQRTDKLLRELRNLDNQKCRETHKMAVIYVANGQEDKGSILRNACGSSTYEMFVSALGWEVEL 1924

  Fly   916 RGFDKYKGGLDTVHDLTGLFSVYTNWRNIEIMFHVSTLLPYEKHDPQK-LQRKRHIGNDIVCVVF 979
            ...:.:.|||.  ....|..:.|.....:|:::||||.:|.:  .|:. |.:.||:|||.|.:|:
Mosquito  1925 ESHNGFLGGLP--RQGCGQTAPYYATPFLEVIYHVSTRMPSD--TPEAILNKTRHLGNDEVHIVW 1985

  Fly   980 LEADNTRFSPACIKSHFLHTFILVRVSARIKHKPTRYEVSVVTRDEVGAYKPYLWEQSVFEKGPM 1044
            .| .|..:....:.:.|....|::     ...|...:.|:|..:.||..:.|...|..|  .|..
Mosquito  1986 SE-HNRDYRRDILPTEFCDVLIVI-----YPLKSGLFRVTVNKKPEVPWFGPLSDEMVV--GGAC 2042

  Fly  1045 FREWLLTKIVNGERASYSA-PKFAR-MQERTRS 1075
            ....:....:|..||..|: |.:.: .:||.||
Mosquito  2043 LASLVRASAINASRAKRSSLPLYQQYYEERNRS 2075

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rshNP_001285176.1 PHA03309 <207..539 CDD:165564 98/596 (16%)
LIM <583..623 CDD:259829 11/48 (23%)
Rap_GAP 893..1074 CDD:460463 48/183 (26%)
BTB_POZ 1289..>1344 CDD:453885
BTB <1467..1526 CDD:197585
BACK 1531..1603 CDD:475122
LOC1273968XP_061497090.1 None
Blue background indicates that the domain is not in the aligned region.

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