DRSC/TRiP Functional Genomics Resources

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Protein Alignment rsh and Rap1gap

DIOPT Version :10

Sequence 1:NP_001285176.1 Gene:rsh / 32253 FlyBaseID:FBgn0265597 Length:1799 Species:Drosophila melanogaster
Sequence 2:XP_006538538.1 Gene:Rap1gap / 110351 MGIID:109338 Length:755 Species:Mus musculus


Alignment Length:446 Identity:160/446 - (35%)
Similarity:236/446 - (52%) Gaps:74/446 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   664 PPQACSDEFCEEYP--HNLM----PTP--------GYWIECSRQKI-TMPTPHTIWDESDSEHED 713
            ||...::|....||  |.::    |.|        |||||.:..:| ::|               
Mouse    82 PPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTNHEISSLP--------------- 131

  Fly   714 IRAGSASDAYLERECSDLYEDDEDSEATPSPRKKTTIEEQWDQQGAFELISVEQETYEKYFYGTE 778
                                   ::|...||..|..:|           .:.....|.|:|.|.|
Mouse   132 -----------------------ETEPLQSPTTKVKLE-----------CNPTARIYRKHFLGKE 162

  Fly   779 HWNYFTSDEDLGPVILSIKQETLNGRDQFRILVRAGSYTVHGLIPASCVFADRYNREEVVRSLGK 843
            |:||::.|..||.::.|:|.:.:..::..|:|:|....|.|.:||.||: .:..|..::.:.:.:
Mouse   163 HFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTHHDVIPISCL-TEFPNVVQMAKLVCE 226

  Fly   844 EVNLN---PPLTLGQLPDTPEELLKLDQVFIKSELKVGVIFVKEDQYTEEQILDNNENSPLFDEF 905
            :||::   |.|    .|.....::..|:..|.:..|.|||:.|..|.:||::...||.||.|.||
Mouse   227 DVNVDRFYPVL----YPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEF 287

  Fly   906 LTLLGDRVRLRGFDKYKGGLDTVHDLTGLFSVYTNWRNIEIMFHVSTLLPYEKHDPQKLQRKRHI 970
            |..||.:|:|:.|..::||||..|..||..|||.|:||.||||||||.|||.:.|.|:|||||||
Mouse   288 LEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHI 352

  Fly   971 GNDIVCVVFLEADNTRFSPACIKSHFLHTFILVRVSARIKHKPTRYEVSVVTRDEVGAYKPYLWE 1035
            |||||.||| :.:||.|.|..|.|:|||.:::|:........|. |:|||..||:|..:.|.|.:
Mouse   353 GNDIVAVVF-QDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPL-YKVSVTARDDVPFFGPPLPD 415

  Fly  1036 QSVFEKGPMFREWLLTKIVNGERASYSAPKFARMQERTRSQMLEDLVMNLSNHAET 1091
            .:||.|||.|:|:||||::|.|.|.|.|.|||:::||||:.:||.|...|..|:::
Mouse   416 PAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQS 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rshNP_001285176.1 PHA03309 <207..539 CDD:165564
LIM <583..623 CDD:259829
Rap_GAP 893..1074 CDD:460463 95/180 (53%)
BTB_POZ 1289..>1344 CDD:453885
BTB <1467..1526 CDD:197585
BACK 1531..1603 CDD:475122
Rap1gapXP_006538538.1 GoLoco 61..81 CDD:214645
Rap_GAP 275..454 CDD:460463 95/180 (53%)
Blue background indicates that the domain is not in the aligned region.

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