DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12715 and AT4G37420

DIOPT Version :9

Sequence 1:NP_001285181.1 Gene:CG12715 / 32252 FlyBaseID:FBgn0030443 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_195458.1 Gene:AT4G37420 / 829896 AraportID:AT4G37420 Length:588 Species:Arabidopsis thaliana


Alignment Length:584 Identity:111/584 - (19%)
Similarity:170/584 - (29%) Gaps:241/584 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RASRTPL---LCCLGLFVVYLLYQSLGSLQVLNNPQGTISQPA----SRPKKVAVVHHGAHPGID 64
            ||..|.|   |..|.||....||.|          ..||.:.|    :||.|...|.:..:....
plant    38 RAHTTTLFFILVSLSLFGFISLYYS----------PNTIYRAAFFATTRPAKSRFVSYVINTQDS 92

  Fly    65 TEGKESAGSQQEPNLEELLRSKEDVDW------VRLRADQCA---PYPRYEDIEF-PN------- 112
            ...:.|.||::       :|: |.|.|      |.:..::.|   |:|....|.| ||       
plant    93 NHHQLSNGSRR-------IRA-EAVLWPGWEILVIVSPEEKAKPPPFPGENYICFYPNGEKSTAR 149

  Fly   113 -----PYFQLTRHENLSYYLYGAYYDRRPRIPEMVVLGMATYNGSYPATYLQVWYD--------- 163
                 |:   :...:....|.|.|....| ||..::.....:..| |.|.   |.|         
plant   150 FAAILPF---SNRASFRCSLPGIYRHHHP-IPTPILASSKRFQLS-PETR---WPDLPLWNFVVF 206

  Fly   164 --------------------GDNQPEKLPVYQSKLGWYKEWGLPEGVVFPTLLTFQMKSQRVPQL 208
                                |.|:|.:  .::...|...:..:...|.......|:..   :|.:
plant   207 EAISTETDVVLLVKGPNRGLGSNKPPE--SFRCVFGEESDTAIRTAVTSSVQEVFRCS---LPNI 266

  Fly   209 -----VSLVFDPCAVPTNAFKVVPP----PPEEPPNAQRPKRIGVC--------VKYLRFPDVDM 256
                 |.:..:..|......|.||.    .|:......|.|.: :|        .||||      
plant   267 TIDTPVKIYLEAVATGKEETKTVPSVAYYSPKRTLVEPREKSL-LCATTMVYNVAKYLR------ 324

  Fly   257 TDRFVEWLELMRLLGATKVTAFDIGLLMPNTRRTLAHYTGAGDGFLDLRKFRFPNETADHETFRA 321
                 ||:.....:|..:...:|               .|:.|...|:.| ...:|..|      
plant   325 -----EWVMYHAAIGIQRFIIYD---------------NGSDDELNDVVK-GLNSEKYD------ 362

  Fly   322 MIIEVL---------------LY-NDCLYRNLYDFDFVAVVDVDEVIMPLGEHRTWQDLLTHLQV 370
             :|:||               :| ||.....:|       :||||.:.    ...|..     |.
plant   363 -VIKVLWIWPKTQEAGFSHAAVYGNDTCTWMMY-------LDVDEFLF----SPAWDK-----QS 410

  Fly   371 QDVNSTTRSSYCFRNVYFSKQLPVDESIPEQFFMLRH---------------------------- 407
            |..:...||           .||.|:|:..|.....|                            
plant   411 QPSDQMIRS-----------LLPSDQSMIGQVSFKSHEFGPSNQTKHPRGGVTQGYTCRREEDQR 464

  Fly   408 ---VIRVA--EHLDPYSAIKCLHDTSYVTLLHNHF----PFQWMNASDPYHVGIDLGQMQHYRY 462
               ::|::  ||             |..|.:| ||    .::|..|.      .:.|.:.||:|
plant   465 HKSIVRLSAVEH-------------SLYTAIH-HFGLKREYEWRVAD------TEEGVVNHYKY 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12715NP_001285181.1 Glyco_transf_92 240..496 CDD:279961 52/284 (18%)
AT4G37420NP_195458.1 Glyco_transf_92 311..541 CDD:279961 51/279 (18%)
WcaA 316..>525 CDD:223539 50/274 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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