DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12716 and agrn

DIOPT Version :9

Sequence 1:NP_572845.1 Gene:CG12716 / 32248 FlyBaseID:FBgn0030439 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_021325504.1 Gene:agrn / 565373 ZFINID:ZDB-GENE-030131-1033 Length:2056 Species:Danio rerio


Alignment Length:396 Identity:83/396 - (20%)
Similarity:130/396 - (32%) Gaps:120/396 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GLGQDADDKEH-KGLGPMQIQYVDYQPNCQPG--GVP--VC------ATNGTDS----------- 105
            |:|...||.|. .||           .:|:||  |:.  ||      ..||.|.           
Zfish   856 GVGSVRDDCEQMSGL-----------CSCKPGVKGMKCNVCPDGSKMGVNGCDKGPKAPKSCAEL 909

  Fly   106 -FYFENHCRLEAANMKMLFQHGTELEPTEMERCLPNCQTMKCTQVER-PVCALAEIGGAIPQTFA 168
             .:|.:.|                :|......|  .|.:..|.:..: .||      |:...|:|
Zfish   910 VCHFGSSC----------------VEVNGQAHC--ECPSPDCDEKNKTKVC------GSDGVTYA 950

  Fly   169 NECEMRKHECHTKQVLRILHTGPCQ---------TPTKSGRKKKLRRNKKKRPTLNASISK---- 220
            :.|:::...|...:.:::.|.|.|:         ||..:       .::...||.:..::|    
Zfish   951 DRCQLKTIACRQDKEIKVEHLGQCKESIELTAKPTPFPT-------THRTTPPTAHVKVTKQRHG 1008

  Fly   221 FATIPKKVYIMLATPAPRSSSTTPRPFFSTTTTRITTTARMRPTKPTSTSPSPMRFQQLMNVANP 285
            ..|.....|::.|.|.||....  |.|.|..||...||    |.||..||..|:.|.:       
Zfish  1009 HRTTTPDSYVVEAMPPPRLDGA--RKFSSPFTTHRPTT----PYKPLRTSSPPLDFDE------- 1060

  Fly   286 MVSVSQAIDAYNVYNIPDVGHDYGEITDSSLSMFLPEVGRVTEPYSVPPRTTTKTTSTTRATTTS 350
                            ...|...|   |..:...:.|.|.  ||......|||..|:..|::..:
Zfish  1061 ----------------SGSGEPSG---DDEMVSGMEESGE--EPLGTTVATTTLPTAEERSSCDN 1104

  Fly   351 TT-----TPKPVLATSRIITPLSTSTMQSFLSVRMPSTTEMVEESTTENPEASTQAFSTTQKSTA 410
            |.     ..|.....|......||.....||.:......|:......|:|:  ::.|..|.:|..
Zfish  1105 TAFGCCPDGKTAAVNSEGTNCPSTMRFSGFLHLDKVEGQEVFYTPEMEDPK--SELFGETARSIE 1167

  Fly   411 TAQTKI 416
            :|..::
Zfish  1168 SAMNEL 1173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12716NP_572845.1 KAZAL_FS 146..192 CDD:238052 10/46 (22%)
agrnXP_021325504.1 NtA 43..146 CDD:308653
KAZAL 200..246 CDD:197624
KAZAL 276..321 CDD:197624
KAZAL_FS 353..393 CDD:238052
KAZAL 422..465 CDD:197624
KAZAL 494..539 CDD:197624
KAZAL 561..606 CDD:197624
KAZAL 626..671 CDD:197624
KAZAL 709..755 CDD:197624
Laminin_EGF 798..840 CDD:278482
Laminin_EGF 852..>888 CDD:278482 13/42 (31%)
KAZAL 932..974 CDD:197624 10/47 (21%)
SEA 1145..1228 CDD:307516 6/31 (19%)
EGF 1328..1356 CDD:306513
LamG 1369..1519 CDD:238058
Laminin_G_1 1663..1794 CDD:278483
EGF_CA 1814..1845 CDD:238011
Laminin_G_1 1908..2039 CDD:278483
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I12169
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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