DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12716 and Fst

DIOPT Version :9

Sequence 1:NP_572845.1 Gene:CG12716 / 32248 FlyBaseID:FBgn0030439 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_036693.1 Gene:Fst / 24373 RGDID:2633 Length:344 Species:Rattus norvegicus


Alignment Length:172 Identity:30/172 - (17%)
Similarity:57/172 - (33%) Gaps:72/172 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VDYQPNCQ--------PGGVPVCATNGTDSFY-------------------------FENHCRLE 115
            |.||..|:        ||. ..|..:.|::.|                         :.:.|.|.
  Rat   158 VQYQGKCKKTCRDVFCPGS-STCVVDQTNNAYCVTCNRICPEPSSSEQSLCGNDGVTYSSACHLR 221

  Fly   116 AANMKMLFQHGTELEPTEMERCL--PNCQTMKC--------------------------TQVERP 152
            .|...:    |..:......:|:  .:|:.::|                          ::.:.|
  Rat   222 KATCLL----GRSIGLAYEGKCIKAKSCEDIQCGGGKKCLWDFKVGRGRCSLCDELCPDSKSDEP 282

  Fly   153 VCALAEIGGAIPQTFANECEMRKHECHTKQVLRILHTGPCQT 194
            |||      :...|:|:||.|::..|.:..:|.:.|:|.|.:
  Rat   283 VCA------SDNATYASECAMKEAACSSGVLLEVKHSGSCNS 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12716NP_572845.1 KAZAL_FS 146..192 CDD:238052 14/71 (20%)
FstNP_036693.1 FOLN 94..117 CDD:128570
KAZAL 117..164 CDD:197624 3/5 (60%)
FOLN 167..190 CDD:128570 5/23 (22%)
KAZAL 192..239 CDD:197624 4/50 (8%)
KAZAL 270..316 CDD:197624 13/51 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 315..344 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3649
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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