DRSC/TRiP Functional Genomics Resources

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Protein Alignment hec and ghrhrb

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_021333028.1 Gene:ghrhrb / 792410 ZFINID:ZDB-GENE-110127-2 Length:529 Species:Danio rerio


Alignment Length:421 Identity:124/421 - (29%)
Similarity:195/421 - (46%) Gaps:69/421 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VIDMR--NVDEELAEKE--ELMATVVSATMAT------NQKENR--------------LFCPLNF 124
            |:|..  .::.|:.|.|  .|..:.:|.:|::      .||..|              ..||..:
Zfish    82 VVDYSCLRMEREILEGEWTPLTTSTISWSMSSPQGLTRTQKRRRKRKASSARHHCKALRGCPTEW 146

  Fly   125 DGYLCWPRTPAGTVLSQYCPDFVEGFNRKFLAHKTCLENGSWYRHPVSNQTWSNYTN-CVDYEDL 188
            |.:.||.....|.|::..|.:..:.|.......:.|.::| |      .:.:.:|.| |...||:
Zfish   147 DEFWCWSGAEVGQVVNISCSEVSQLFVNHGFIFRNCTKDG-W------TEVYPSYENACEIVEDV 204

  Fly   189 E----------FRQFINELYVKGYALSLLALLISIIIFLGFKSLRCTRIRIHVHLFASLACTCVA 243
            |          |||    :|..|||.||::|:.:|.:|..|:...|||..||::||||......|
Zfish   205 ESETETTYYATFRQ----VYTAGYATSLISLITAIFVFTVFRKFHCTRNYIHINLFASFILRASA 265

  Fly   244 WILWYRLVVERSETIAENPL--------WCIGLHLVVHYFMLVNYFWMFCEGLHLHLVLVVVFVK 300
                  :.::.:...|:..|        .|........:.:|.||||:..||::|..:|.:.||.
Zfish   266 ------IFIKDAVLFADENLDHCFMSTTSCKAAVAFFQFSILANYFWLLVEGMYLQTLLALTFVS 324

  Fly   301 DTIVMRWFIVISWFSPIPIAIVYGLARHFSSPDNKHCW-ITDSLYL-WIFSVPITLSLLASFIFL 363
            ......|:|:|.|..|..|..::.|||:|.  ||..|| .||..|. ||...|||:|||.:|:..
Zfish   325 QKKYFWWYILIGWGLPTLILTIWVLARNFF--DNNGCWDDTDVAYFWWIIKGPITVSLLINFLIF 387

  Fly   364 INVLRVIVRKL-HPQSAQPAPLAIRKAVRATIILVPLFGLQHFLLPYRPD-AGTQLDHFYQMLSV 426
            |||:|::|:|| .|...........:..::|:.|:||||:.:.:..:.|: .|....||   |.:
Zfish   388 INVIRILVQKLKSPGMGGGDTNHFMRLAKSTLFLIPLFGMHYMVFAFLPENTGENARHF---LEL 449

  Fly   427 VLVSLQGFVVSFLFCFANHDVTFAIRTLLNK 457
            .|...|||||:.|:||.|.:|...::..|.|
Zfish   450 GLGPFQGFVVALLYCFLNGEVQAELKKRLWK 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 15/67 (22%)
7tm_4 216..436 CDD:304433 75/231 (32%)
ghrhrbXP_021333028.1 HRM 141..199 CDD:308439 14/64 (22%)
7tmB1_GHRHR2 213..480 CDD:320399 94/281 (33%)
TM helix 1 215..240 CDD:320399 12/28 (43%)
TM helix 2 249..271 CDD:320399 7/27 (26%)
TM helix 3 290..317 CDD:320399 8/26 (31%)
TM helix 4 329..349 CDD:320399 6/19 (32%)
TM helix 5 364..394 CDD:320399 15/29 (52%)
TM helix 6 410..437 CDD:320399 6/26 (23%)
TM helix 7 442..467 CDD:320399 12/27 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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