DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hec and gcgrb

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_009293538.1 Gene:gcgrb / 565237 ZFINID:ZDB-GENE-050516-2 Length:509 Species:Danio rerio


Alignment Length:360 Identity:89/360 - (24%)
Similarity:165/360 - (45%) Gaps:44/360 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 LFCPLNFDGYLCWPRTPAGTVLSQYCPDFVEGFNR--KFLAHKTCLENGSWYRHPVSNQTWSNYT 180
            |.|...||.|:|||....||.::..||.::..:::  ..|.::.|..:|.|..       ..|.:
Zfish    51 LVCNRTFDQYVCWPDGLPGTTVNVSCPWYLPWYSKVDHGLVYRVCGADGRWVH-------GKNTS 108

  Fly   181 NCVDYEDLEFRQF------INELYVKGYALSLLALLISIIIFLGFKSLRCTRIRIHVHLFASLAC 239
            .| :.:|...:|:      ...:|..||:|||.||.:::.|.:.|:.|.|.|..||::||.|...
Zfish   109 EC-EQDDPGQKQYGQILSKFRAMYTVGYSLSLAALTLALGILVSFRKLHCMRNNIHMNLFGSFMV 172

  Fly   240 TCVAWILWYRLVVERSETIA-----ENPLW--------CIGLHLVVHYFMLVNYFWMFCEGLHLH 291
            ..::.::...|:.:.:...:     ::..|        |....:::.|.::.|..|:..|||:||
Zfish   173 RALSILIKDTLLDQMNRARSGPSHYQSTRWLDTQTVVGCRSAMVMMQYSVMANNCWLLVEGLYLH 237

  Fly   292 LVLVVVFVKDTIVMRWFIVISWFSPIPIAIVYGLARHFSSPDNKHCWITDSL--YLWIFSVPITL 354
            .:||.....:......::.|.|.:|:...:.:...::..  :|:.||..:..  |.||...||..
Zfish   238 SLLVTTVFSERNYFCIYLCIGWGAPLIFVLPWMTVKYLY--ENEECWERNMNMGYWWIIRSPILF 300

  Fly   355 SLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATIILVPLFGLQHFLLPYRPDAGTQLDH 419
            :.|.:||..|.::::::.||.....:......|.| ::|:.|:||.|:...|..:..|.....:.
Zfish   301 AYLINFIIFIRIIKILMSKLKAHQMRYTDYKFRLA-KSTLTLIPLLGIHAVLFTFVIDESVPKES 364

  Fly   420 -------FYQMLSVVLVSLQGFVVSFLFCFANHDV 447
                   ||.:|   ..|.||.:|:.|:||.|.:|
Zfish   365 LLRLIRLFYDLL---FSSFQGLLVAILYCFVNKEV 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 18/68 (26%)
7tm_4 216..436 CDD:304433 54/241 (22%)
gcgrbXP_009293538.1 HRM 50..113 CDD:280888 18/69 (26%)
7tm_2 124..385 CDD:278432 63/266 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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