DRSC/TRiP Functional Genomics Resources

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Protein Alignment hec and calcrl

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_012825895.1 Gene:calcrl / 549647 XenbaseID:XB-GENE-5736126 Length:481 Species:Xenopus tropicalis


Alignment Length:350 Identity:130/350 - (37%)
Similarity:199/350 - (56%) Gaps:10/350 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 NQKENRLFCPLNFDGYLCWPRTPAGTVLSQYCPDFVEGFNRKFLAHKTCLENGSWYRHPVSNQTW 176
            |.||.. ||...:||:|||....||.:..|.|||:.:.|:......|.|.:||.|:|||.||:||
 Frog    77 NGKEGH-FCNRTWDGWLCWGDVSAGVISEQRCPDYFQDFDPSEKVTKECGKNGHWFRHPDSNRTW 140

  Fly   177 SNYTNCVDYEDLEFRQFINELY--VKGYALSLLALLISIIIFLGFKSLRCTRIRIHVHLFASLAC 239
            :|||.|..:...:.:..:|..|  :.|:.||:.:||||:.||..||:|.|.||.:|.:||.|..|
 Frog   141 TNYTRCNTFTHEKVKTALNLYYLTIIGHGLSIASLLISLGIFFYFKNLSCQRITLHKNLFFSFVC 205

  Fly   240 TCVAWILWYRLVVERSETIAENPLWCIGLHLVVHYFMLVNYFWMFCEGLHLH-LVLVVVFVKDTI 303
            ..:..|:....|......:|.||:.|.....:..|.|..|||||.|||::|| |::|.||.:...
 Frog   206 NSIITIISLSAVANNQALVATNPVSCKISQFIHLYLMGCNYFWMLCEGIYLHTLIVVAVFAEKQH 270

  Fly   304 VMRWFIVISWFSPIPIAIVYGLARHFSSPDNKHCWITDSLY-LWIFSVPITLSLLASFIFLINVL 367
            :| |:.::.|..|:..|.::.:||.....||  |||:...: |:|...||..:||.:..||:|::
 Frog   271 LM-WYYLLGWGFPLIPACIHAVARSLYYNDN--CWISSETHLLYIIHGPICAALLVNLFFLLNIV 332

  Fly   368 RVIVRKLHPQSAQPAPLAIRKAVRATIILVPLFGLQHFLLPYRPDAGTQLDHFYQMLSVVLVSLQ 432
            ||::.||.......:.|.: ||||||:|||||.|::..|.|::|: |...:..|..:..:|:..|
 Frog   333 RVLITKLKVTHQAESNLYM-KAVRATLILVPLLGIEFVLFPWKPE-GRIAEEIYDYVMHILMHYQ 395

  Fly   433 GFVVSFLFCFANHDVTFAIRTLLNK 457
            |.:|:.:|||.|.:|...::...|:
 Frog   396 GLLVATIFCFFNGEVQAVLKRHWNQ 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 30/66 (45%)
7tm_4 216..436 CDD:304433 80/221 (36%)
calcrlXP_012825895.1 HRM 81..149 CDD:367186 30/68 (44%)
7tmB1_calcitonin_R 157..429 CDD:341343 97/268 (36%)
TM helix 1 159..184 CDD:341343 11/24 (46%)
TM helix 2 193..215 CDD:341343 7/21 (33%)
TM helix 3 232..259 CDD:341343 12/26 (46%)
TM helix 4 271..291 CDD:341343 5/20 (25%)
TM helix 5 306..335 CDD:341343 10/28 (36%)
TM helix 6 349..376 CDD:341343 15/27 (56%)
TM helix 7 382..407 CDD:341343 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I3583
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46801
OrthoDB 1 1.010 - - D1005634at2759
OrthoFinder 1 1.000 - - FOG0001436
OrthoInspector 1 1.000 - - mtm9427
Panther 1 1.100 - - O PTHR45620
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.030

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