DRSC/TRiP Functional Genomics Resources

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Protein Alignment hec and ghrhra

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001124524.1 Gene:ghrhra / 541314 ZFINID:ZDB-GENE-050315-2 Length:432 Species:Danio rerio


Alignment Length:349 Identity:105/349 - (30%)
Similarity:171/349 - (48%) Gaps:24/349 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 CPLNFDGYLCWPRTPAGTVLSQYCPD-FVEGFNRKFLAHKTCLENGSWYRHPVSNQTWSNYTNCV 183
            |..::||..||.....|.:::..|.| |....|.:...::.|:.|| |      ...:..|....
Zfish    53 CGTDWDGIRCWHTANTGQLINVSCSDVFQHISNTQGFIYRNCVSNG-W------TDPYPPYEEAC 110

  Fly   184 DYED-------LEFRQFINELYVKGYALSLLALLISIIIFLGFKSLRCTRIRIHVHLFASLACTC 241
            .:||       ..:...:.:||..|||.||::|:.::|||..|:...|||..||::||.|.....
Zfish   111 AFE
DDSESGTVTTYLSTLKQLYTAGYATSLISLITAVIIFTCFRKFHCTRNYIHINLFVSFILRA 175

  Fly   242 VAWILWYRLVV--ERSETIAENPLWCIGLHLVVHYFMLVNYFWMFCEGLHLHLVLVVVFVKDTIV 304
            .|..:...::.  |..:....:.:.|........:.:|.||||:..|||:|..:|.:.||.....
Zfish   176 SAVFIKGTVLFSDETQDHCLMSTVLCKSAVTFFQFCILTNYFWLLVEGLYLQTLLALTFVSQRKY 240

  Fly   305 MRWFIVISWFSPIPIAIVYGLARHFSSPDNKHCW-ITDSLYL-WIFSVPITLSLLASFIFLINVL 367
            ..|:|:|.|..|..:.:|:.|.|.|.  ||:.|| .||:..: ||...|||.||..:.|..:||:
Zfish   241 FWWYILIGWGVPSVVLVVWVLTRQFY--DNRGCWDDTDNTNIWWIIKGPITASLFTNIIIFLNVI 303

  Fly   368 RVIVRKL-HPQSAQPAPLAIRKAVRATIILVPLFGLQHFLLPYRPDAGTQLDHFYQMLSVVLVSL 431
            |::|:|| .|...........:..::|:.|:||||:.:.|..:.|:...::..||  :.:.|.|.
Zfish   304 RILVQKLKSPGVGGNDTGHFMRLAKSTLFLIPLFGMHYTLFAFLPENTGEIIRFY--IELGLGSF 366

  Fly   432 QGFVVSFLFCFANHDVTFAIRTLL 455
            |||||:.|:||.|.:|...::..|
Zfish   367 QGFVVALLYCFLNGEVQAELKRRL 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 15/65 (23%)
7tm_4 216..436 CDD:304433 70/224 (31%)
ghrhraNP_001124524.1 HRM 50..113 CDD:280888 15/66 (23%)
7tm_2 125..371 CDD:278432 80/249 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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