DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hec and vipr1b

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_005162755.1 Gene:vipr1b / 503868 ZFINID:ZDB-GENE-050311-6 Length:446 Species:Danio rerio


Alignment Length:446 Identity:114/446 - (25%)
Similarity:198/446 - (44%) Gaps:78/446 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 FSPVPRYLENAAMNEGVIDMRNVDEELAEKEELMATVVSATMATNQKENRLF------CPLNFDG 126
            ||||           ..:.|.:|..|:             .:|..:.||:..      |...:|.
Zfish    17 FSPV-----------AAVQMCDVVNEI-------------ELARARCENKTAGNVTSGCKGMWDI 57

  Fly   127 YLCWPRTPAGTVLSQYCPDFVEGFNRKFLAH--KTCLENGSWYRHPVSNQTWSNY------TNC- 182
            ..|||....|..:...||::...|:.:...:  |||..:|           |:..      .|| 
Zfish    58 IACWPSAKIGEHVVIPCPNYFRHFSDQHEGNLSKTCTADG-----------WTEMDSLEIAVNCG 111

  Fly   183 ------VDYEDLEFRQFINELYVKGYALSLLALLISIIIFLGFKSLRCTRIRIHVHLFASLACTC 241
                  || :|..||. :...|..|:::||::|..:|.|...|:.|.|||..||:|||.|.....
Zfish   112 YNLNGTVD-DDSFFRS-VKIGYTIGHSVSLISLTTAIAILCIFRKLHCTRNYIHMHLFVSFILKA 174

  Fly   242 VAWILWYRL---VVERSETIAENPLWCIGLHLVVHYFMLVNYFWMFCEGLHLHLVLVVVFVKDTI 303
            :|..:...:   ||:.|:..:...:.|..:.:...|.::.::||:..|||::|.:|.|.|..:..
Zfish   175 IAVFVKDAVLYDVVQESDNCSTGSVGCKAVIVFFQYCIMASFFWLLVEGLYIHALLAVSFFSERK 239

  Fly   304 VMRWFIVISWFSPIPIAIVYGLARHFSSPDNKHCW--ITDS-LYLWIFSVPITLSLLASFIFLIN 365
            ....:|:|.|..|....:.:..|:.:.  ::..||  |.:| .:.||...||..|:|.:||..|.
Zfish   240 YFWCYILIGWGGPTVFIMAWSFAKAYF--NDVGCWDIIENSDPFWWIIKTPILASILMNFILFIC 302

  Fly   366 VLRVIVRKLH-PQSAQPAPLAIRKAVRATIILVPLFGLQHFLLPYRPD-AGTQLDHFYQMLSVVL 428
            ::|::.:|:: |...:.......:..::|::|:||||:...:..:.|: ..|:|...:.:   :|
Zfish   303 IIRILRQKINCPDIGRNESNQYSRLAKSTLLLIPLFGINFIIFAFIPENIKTELRLVFDL---IL 364

  Fly   429 VSLQGFVVSFLFCFANHDVTFAIRTLLNKL-LPSLVTP------PPAGSNTGQMAT 477
            .|.|||||:.|:||.|.:|...|:....:. |...:.|      |..|||....:|
Zfish   365 GSFQGFVVAVLYCFLNGEVQGEIKRKWRRWHLERFLGPDTKYQHPSMGSNGNNFST 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 17/87 (20%)
7tm_4 216..436 CDD:304433 61/227 (27%)
vipr1bXP_005162755.1 HormR 48..115 CDD:214468 16/77 (21%)
7tm_2 124..372 CDD:278432 70/253 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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