DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hec and Sctr

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001012322.2 Gene:Sctr / 319229 MGIID:2441720 Length:464 Species:Mus musculus


Alignment Length:450 Identity:120/450 - (26%)
Similarity:211/450 - (46%) Gaps:67/450 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LENAAMNEGVI----DMRNV--DE------ELAEKEELM-----ATVVSATMATNQKENRLFCPL 122
            |.|||...|.:    |:|.|  :|      ||:|:::.:     :.:|.:..|.:...:: .|..
Mouse    19 LINAAHPVGALPRLCDVRRVLLEERAECLRELSEEKKALGPKTASAIVFSPSAPSYTVHQ-GCER 82

  Fly   123 NFDGYLCWPRTPAGTVLSQYCPDFVEGFNRKFLAHKTCLENGSWYRHPVSNQTWSNYTNCVDYED 187
            .:|...|||.:.....:...||.|:..|:.:         |||.:|    |.|...::......|
Mouse    83 FWDNMSCWPSSALAQTVEVPCPKFLRMFSGR---------NGSLFR----NCTKDGWSETFPRPD 134

  Fly   188 L----EFRQFINE-----------LYVKGYALSLLALLISIIIFLGFKSLRCTRIRIHVHLFASL 237
            |    ......||           :|..||:.||..||:::.|...|:.|.|||..||:|||.|.
Mouse   135 LACGVNMNGSFNERRHAYLLKLKVMYTVGYSSSLAMLLVALSILCSFRRLHCTRNYIHMHLFVSF 199

  Fly   238 ACTCVAWILWYRLVVERSETIAENPLWC----IGLHLVVHYF---MLVNYFWMFCEGLHLHLVLV 295
            ....::     ..:.:.....|::..:|    .|..||:.:|   ::.||.|:..|||:||.:|.
Mouse   200 ILRALS-----NFIKDAVLFPADDVTYCDAHRAGCKLVMIFFQYCIMANYAWLLVEGLYLHTLLA 259

  Fly   296 VVFVKDTIVMRWFIVISWFSPIPIAIVYGLARHFSSPDNKHCWITDS--LYLWIFSVPITLSLLA 358
            :.|..:...::.|::..|.||.....::.:.|||.  ::..||..:|  ...|:...|:.||::.
Mouse   260 ISFFSERKCLQAFVLFGWGSPAIFVALWAVTRHFL--EDFGCWDINSNASIWWVIRGPVILSIVI 322

  Fly   359 SFIFLINVLRVIVRKLHPQSAQPAPL-AIRKAVRATIILVPLFGLQHFLLPYRPDAGTQLDHFYQ 422
            :|||.||:||:::|||..|..:.... ..::..::|::|:||||:.:.:..:.|:...::..|::
Mouse   323 NFIFFINILRILMRKLRTQETRGNETHHYKRLAKSTLLLIPLFGIHYIVFAFSPEGAMEVQLFFE 387

  Fly   423 MLSVVLVSLQGFVVSFLFCFANHDVTFAIRTLLNKL-LPSLVTPPPAGSNTGQMATTTPS 481
            :   .|.|.||.||:.|:||.|.:|...::....:. |......|.|.||:...||..|:
Mouse   388 L---ALGSFQGLVVAVLYCFLNGEVQLEVQKKWRQWHLQEFPLRPVALSNSFSNATNGPT 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 15/66 (23%)
7tm_4 216..436 CDD:304433 64/229 (28%)
SctrNP_001012322.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.