DRSC/TRiP Functional Genomics Resources

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Protein Alignment hec and pth2ra

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_571452.1 Gene:pth2ra / 30650 ZFINID:ZDB-GENE-991123-10 Length:575 Species:Danio rerio


Alignment Length:470 Identity:126/470 - (26%)
Similarity:212/470 - (45%) Gaps:68/470 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LPENFSPVPRYLENAAMNEGVIDMRNVDEELAEKEELMATVVSATMATNQKENR-----LFCPLN 123
            ||:.|  :..:| |..:..|      .|.|:..:|::. .::.|.:...||.:.     ..|...
Zfish    42 LPKTF--IKSFL-NHLLQAG------EDGEITAEEQVQ-MLLDAKLQCLQKVSSDDPAVGVCVPE 96

  Fly   124 FDGYLCWPRTPAGTVLSQYCPDFVEGFNRKFLAHKTCLENGSWYRHPVSNQTWSNYTNCV-DYED 187
            :||.:|||:...||:....||.::..||....|::.|..|||......||:||.|||.|: ..|.
Zfish    97 WDGLICWPQGFPGTLTKTPCPGYIYDFNHAAHAYRRCDSNGSSVLAESSNKTWVNYTECIKSPEP 161

  Fly   188 LEFRQFINE----LYVKGYALSLLALLISIIIFLGFKSLRCTRIRIHVHLFASLACTCVAWILWY 248
            .:.||...|    :|..|||:|..:||::|.|...|:.|.|||..||:|||.|......:..:..
Zfish   162 NKKRQVFFERLHIMYTVGYAVSFSSLLVAIFIIGYFRRLHCTRNYIHMHLFVSFMLRAASIFVKD 226

  Fly   249 RLV-----VERSETIAENP---------------LWCIGLHLVVHYFMLVNYFWMFCEGLHLHLV 293
            .:|     ::.|:.:..|.               :.|....|:..||:..||:|:..|||:||.:
Zfish   227 HVVHTSAGLQESDAVLMNNFTNAVDVAPVDTSQYMGCKVTVLLFIYFLATNYYWILVEGLYLHSL 291

  Fly   294 LVVVFVKDTIVMRWFIVISWFSPIPIAIVYGLARHFSSPDNKHCW-ITDSLYLWIFSVPITLSLL 357
            :.:.|:.|:..:..|.:|.|..|......:.:.|  ::..:..|| ::.....||:.|||..::.
Zfish   292 IFMAFLSDSKYLWGFTLIGWGVPAVFVAAWAVVR--ATLADARCWELSAGNIKWIYQVPILTAIG 354

  Fly   358 ASFIFLINVLRVIVRKLHPQSA--QPAPLAIRKAVRATIILVPLFGLQHFLLPYRPDAGTQLDHF 420
            .:||..:|::||:..|:...:|  .......||..::|.:||.:||:.:.:....|       |.
Zfish   355 LNFILFVNIVRVLATKIRETNAGRYDTRKQYRKLAKSTQVLVFVFGVHYIVFVGMP-------HT 412

  Fly   421 YQML--------SVVLVSLQGFVVSFLFCFANHDVTFAIRTLLNK--LLPSLVTPPPAGSN---- 471
            ::.|        .:...|.|||.||.::|:.|.:|...|:....:  |......|...|||    
Zfish   413 FEGLGWEERMYCELFFNSFQGFFVSIIYCYCNGEVQTEIKKTWTRWNLAFDWKGPVVCGSNRYGS 477

  Fly   472 --TGQMATTTPSREL 484
              ||...:|:...:|
Zfish   478 VLTGLNNSTSSQSQL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 25/67 (37%)
7tm_4 216..436 CDD:304433 61/250 (24%)
pth2raNP_571452.1 HRM 92..156 CDD:367186 24/63 (38%)
7tm_GPCRs 169..457 CDD:391938 77/296 (26%)
TM helix 1 172..196 CDD:341315 9/23 (39%)
TM helix 2 205..226 CDD:341315 6/20 (30%)
TM helix 3 264..286 CDD:341315 7/21 (33%)
TM helix 4 305..321 CDD:341315 4/15 (27%)
TM helix 5 338..361 CDD:341315 7/22 (32%)
TM helix 6 386..411 CDD:341315 8/31 (26%)
TM helix 7 419..444 CDD:341315 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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