DRSC/TRiP Functional Genomics Resources

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Protein Alignment hec and Vipr2

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_058934.2 Gene:Vipr2 / 29555 RGDID:3962 Length:437 Species:Rattus norvegicus


Alignment Length:406 Identity:108/406 - (26%)
Similarity:197/406 - (48%) Gaps:39/406 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 ELAEKEELMATVVSATMATNQKENRLFCPLNFDGYLCWPRTPAGTVLSQYCPD-FVEGFNRKFLA 156
            |:.|:|...|.::|     :|.||...|...:|...||.....|..::..||. |...::|....
  Rat    29 EIQEEETKCAELLS-----SQMENHRACSGVWDNITCWRPADIGETVTVPCPKVFSNFYSRPGNI 88

  Fly   157 HKTCLENGSWYRHPVSNQTWSNYTNCVDYEDLE------FRQFINELYVKGYALSLLALLISIII 215
            .|.|..:| |      ::|:.::.:...|.|.|      |...:..:|..||::||::|....||
  Rat    89 SKNCTSDG-W------SETFPDFIDACGYNDPEDESKITFYILVKAIYTLGYSVSLMSLTTGSII 146

  Fly   216 FLGFKSLRCTRIRIHVHLFASLACTCVAWILWYRLVVERSETIA--ENPLWCIGLHLVVHYF--- 275
            ...|:.|.|||..||::||.|.....::.::...::...|.|:.  :.|...:|..|.:.:|   
  Rat   147 ICLFRKLHCTRNYIHLNLFLSFMLRAISVLVKDSVLYSSSGTLRCHDQPGSWVGCKLSLVFFQYC 211

  Fly   276 MLVNYFWMFCEGLHLHLVLVVVFVKDTIVMRWFIVISWFSPIPIAIVYGLARHFSSPDNKHCWIT 340
            ::.|::|:..|||:||.:||.:.......:. :::|.|..| .:.|...:|...|..|. .||.|
  Rat   212 IMANFYWLLVEGLYLHTLLVAILPPSRCFLA-YLLIGWGIP-SVCIGAWIATRLSLEDT-GCWDT 273

  Fly   341 D--SLYLWIFSVPITLSLLASFIFLINVLRVIVRKL-HPQSAQPAPLAIRKAVRATIILVPLFGL 402
            :  |:..|:..:||.:|::.:|...|:::|::::|| .|..........::..::|::|:||||:
  Rat   274 NDHSIPWWVIRMPILISIVVNFALFISIVRILLQKLTSPDVGGNDQSQYKRLAKSTLLLIPLFGV 338

  Fly   403 QHFLLPYRPDAGTQLDHFYQMLSVVLV-SLQGFVVSFLFCFANHDVTFAIRTLLNKLLPSLVTPP 466
            .:.:....|   ..:...||:|..:.| |.||.||:.|:||.|.:|...::.....|   .:|.|
  Rat   339 HYMVFAAFP---IGISSTYQILFELCVGSFQGLVVAVLYCFLNSEVQCELKRRWRGL---CLTQP 397

  Fly   467 PAGSNTGQMATTTPSR 482
              ||...::.:.:.||
  Rat   398 --GSRDYRLHSWSMSR 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 14/67 (21%)
7tm_4 216..436 CDD:304433 60/228 (26%)
Vipr2NP_058934.2 HormR 47..117 CDD:214468 18/76 (24%)
7tmB1_VIP-R2 122..390 CDD:320652 75/273 (27%)
TM helix 1 125..149 CDD:320652 8/23 (35%)
TM helix 2 158..179 CDD:320652 5/20 (25%)
TM helix 3 202..224 CDD:320652 5/21 (24%)
TM helix 4 242..258 CDD:320652 4/17 (24%)
TM helix 5 276..299 CDD:320652 6/22 (27%)
TM helix 6 326..348 CDD:320652 7/24 (29%)
TM helix 7 353..378 CDD:320652 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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